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Items: 1 to 20 of 26

1.
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development
Francesco Bedogni, Robert F. Hevner
Front Mol Neurosci. 2021; 14: 686034. Published online 2021 Jul 12. doi: 10.3389/fnmol.2021.686034
PMCID:
PMC8313239
AbstractArticlePDF–1.6M
2.
NOVA2 regulates neural circRNA biogenesis
David Knupp, Daphne A Cooper, Yuhki Saito, Robert B Darnell, Pedro Miura
Nucleic Acids Res. 2021 Jul 9; 49(12): 6849–6862. Published online 2021 Jun 22. doi: 10.1093/nar/gkab523
PMCID:
PMC8266653
AbstractArticlePDF–12M
3.
Temporal regulation of axonal repulsion by alternative splicing of a conserved microexon in mammalian Robo1 and Robo2
Verity Johnson, Harald J Junge, Zhe Chen
eLife. 2019; 8: e46042. Published online 2019 Aug 8. doi: 10.7554/eLife.46042
PMCID:
PMC6687390
AbstractArticlePDF–3.7M
4.
Differential NOVA2-mediated splicing in excitatory and inhibitory neurons regulates cortical development and cerebellar function
Yuhki Saito, Yuan Yuan, Ilana Zucker-Scharff, John J. Fak, Saša Jereb, Yoko Tajima, Donny D. Licatalosi, Robert B. Darnell
Neuron. Author manuscript; available in PMC 2020 Feb 20.
Published in final edited form as: Neuron. 2019 Feb 20; 101(4): 707–720.e5. Published online 2019 Jan 9. doi: 10.1016/j.neuron.2018.12.019
PMCID:
PMC6649687
AbstractArticlePDF–2.2M
5.
CITGeneDB: a comprehensive database of human and mouse genes enhancing or suppressing cold-induced thermogenesis validated by perturbation experiments in mice
Jin Li, Su-Ping Deng, Gang Wei, Peng Yu
Database (Oxford) 2018; 2018: bay012. Published online 2018 Mar 23. doi: 10.1093/database/bay012
PMCID:
PMC5868181
AbstractArticlePDF–653K
6.
An alternative splicing program promotes adipose tissue thermogenesis
Santiago Vernia, Yvonne JK Edwards, Myoung Sook Han, Julie Cavanagh-Kyros, Tamera Barrett, Jason K Kim, Roger J Davis
eLife. 2016; 5: e17672. Published online 2016 Sep 16. doi: 10.7554/eLife.17672
PMCID:
PMC5026472
AbstractArticlePDF–3.1M
7.
NOVA regulates Dcc alternative splicing during neuronal migration and axon guidance in the spinal cord
Janelle C Leggere, Yuhki Saito, Robert B Darnell, Marc Tessier-Lavigne, Harald J Junge, Zhe Chen
eLife. 2016; 5: e14264. Published online 2016 May 25. doi: 10.7554/eLife.14264
PMCID:
PMC4930329
AbstractArticlePDF–8.3M
8.
NOVA2-mediated RNA regulation is required for axonal pathfinding during development
Yuhki Saito, Soledad Miranda-Rottmann, Matteo Ruggiu, Christopher Y Park, John J Fak, Ru Zhong, Jeremy S Duncan, Brian A Fabella, Harald J Junge, Zhe Chen, Roberto Araya, Bernd Fritzsch, A J Hudspeth, Robert B Darnell
eLife. 2016; 5: e14371. Published online 2016 May 25. doi: 10.7554/eLife.14371
PMCID:
PMC4930328
AbstractArticlePDF–6.2M
9.
The alternative splicing factor Nova2 regulates vascular development and lumen formation
Costanza Giampietro, Gianluca Deflorian, Stefania Gallo, Anna Di Matteo, Davide Pradella, Serena Bonomi, Elisa Belloni, Daniel Nyqvist, Valeria Quaranta, Stefano Confalonieri, Giovanni Bertalot, Fabrizio Orsenigo, Federica Pisati, Elisabetta Ferrero, Giuseppe Biamonti, Evelien Fredrickx, Carla Taveggia, Chris D. R. Wyatt, Manuel Irimia, Pier Paolo Di Fiore, Benjamin J. Blencowe, Elisabetta Dejana, Claudia Ghigna
Nat Commun. 2015; 6: 8479. Published online 2015 Oct 8. doi: 10.1038/ncomms9479
PMCID:
PMC4633719
AbstractArticlePDF–3.4M
10.
A conditional knockout resource for the genome–wide study of mouse gene function
William C. Skarnes, Barry Rosen, Anthony P. West, Manousos Koutsourakis, Wendy Bushell, Vivek Iyer, Alejandro O. Mujica, Mark Thomas, Jennifer Harrow, Tony Cox, David Jackson, Jessica Severin, Patrick Biggs, Jun Fu, Michael Nefedov, Pieter J. de Jong, A. Francis Stewart, Allan Bradley
Nature. Author manuscript; available in PMC 2013 Feb 14.
Published in final edited form as: Nature. 2011 Jun 15; 474(7351): 337–342. Published online 2011 Jun 15. doi: 10.1038/nature10163
PMCID:
PMC3572410
AbstractArticlePDF–1.1M
11.
NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure
Taesun Eom, Chaolin Zhang, Huidong Wang, Kenneth Lay, John Fak, Jeffrey L Noebels, Robert B Darnell
eLife. 2013; 2: e00178. Published online 2013 Jan 22. doi: 10.7554/eLife.00178
PMCID:
PMC3552424
AbstractArticlePDF–5.5M
12.
Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls
Chaolin Zhang, Maria A. Frias, Aldo Mele, Matteo Ruggiu, Taesun Eom, Christina B. Marney, Huidong Wang, Donny D. Licatalosi, John J. Fak, Robert B. Darnell
Science. Author manuscript; available in PMC 2012 Aug 6.
Published in final edited form as: Science. 2010 Jul 23; 329(5990): 439–443. Published online 2010 Jun 17. doi: 10.1126/science.1191150
PMCID:
PMC3412410
AbstractArticlePDF–2.3M
13.
Ptbp2 represses adult-specific splicing to regulate the generation of neuronal precursors in the embryonic brain
Donny D. Licatalosi, Masato Yano, John J. Fak, Aldo Mele, Sarah E. Grabinski, Chaolin Zhang, Robert B. Darnell
Genes Dev. 2012 Jul 15; 26(14): 1626–1642. doi: 10.1101/gad.191338.112
PMCID:
PMC3404389
AbstractArticlePDF–3.4M
14.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
15.
A High-Resolution Anatomical Atlas of the Transcriptome in the Mouse Embryo
Graciana Diez-Roux, Sandro Banfi, Marc Sultan, Lars Geffers, Santosh Anand, David Rozado, Alon Magen, Elena Canidio, Massimiliano Pagani, Ivana Peluso, Nathalie Lin-Marq, Muriel Koch, Marchesa Bilio, Immacolata Cantiello, Roberta Verde, Cristian De Masi, Salvatore A. Bianchi, Juliette Cicchini, Elodie Perroud, Shprese Mehmeti, Emilie Dagand, Sabine Schrinner, Asja Nürnberger, Katja Schmidt, Katja Metz, Christina Zwingmann, Norbert Brieske, Cindy Springer, Ana Martinez Hernandez, Sarah Herzog, Frauke Grabbe, Cornelia Sieverding, Barbara Fischer, Kathrin Schrader, Maren Brockmeyer, Sarah Dettmer, Christin Helbig, Violaine Alunni, Marie-Annick Battaini, Carole Mura, Charlotte N. Henrichsen, Raquel Garcia-Lopez, Diego Echevarria, Eduardo Puelles, Elena Garcia-Calero, Stefan Kruse, Markus Uhr, Christine Kauck, Guangjie Feng, Nestor Milyaev, Chuang Kee Ong, Lalit Kumar, MeiSze Lam, Colin A. Semple, Attila Gyenesei, Stefan Mundlos, Uwe Radelof, Hans Lehrach, Paolo Sarmientos, Alexandre Reymond, Duncan R. Davidson, Pascal Dollé, Stylianos E. Antonarakis, Marie-Laure Yaspo, Salvador Martinez, Richard A. Baldock, Gregor Eichele, Andrea Ballabio
PLoS Biol. 2011 Jan; 9(1): e1000582. Published online 2011 Jan 18. doi: 10.1371/journal.pbio.1000582
PMCID:
PMC3022534
AbstractArticlePDF–3.8M
16.
Nova2 regulates neuronal migration through an RNA switch in disabled-1 signaling
Masato Yano, Yoshika Hayakawa-Yano, Aldo Mele, Robert B. Darnell
Neuron. Author manuscript; available in PMC 2011 Jun 24.
Published in final edited form as: Neuron. 2010 Jun 24; 66(6): 848–858. doi: 10.1016/j.neuron.2010.05.007
PMCID:
PMC2965850
AbstractArticlePDF–2.1M
17.
Rescuing Z+ agrin splicing in Nova null mice restores synapse formation and unmasks a physiologic defect in motor neuron firing
Matteo Ruggiu, Ruth Herbst, Natalie Kim, Marko Jevsek, John J. Fak, Mary Anne Mann, Gerald Fischbach, Steven J. Burden, Robert B. Darnell
Proc Natl Acad Sci U S A. 2009 Mar 3; 106(9): 3513–3518. Published online 2009 Feb 12. doi: 10.1073/pnas.0813112106
PMCID:
PMC2642475
AbstractArticlePDF–1.7M
18.
HITS-CLIP yields genome-wide insights into brain alternative RNA processing
Donny D. Licatalosi, Aldo Mele, John J. Fak, Jernej Ule, Melis Kayikci, Sung Wook Chi, Tyson A. Clark, Anthony C. Schweitzer, John E. Blume, Xuning Wang, Jennifer C. Darnell, Robert B. Darnell
Nature. Author manuscript; available in PMC 2009 May 27.
Published in final edited form as: Nature. 2008 Nov 27; 456(7221): 464–469. Published online 2008 Nov 2. doi: 10.1038/nature07488
PMCID:
PMC2597294
AbstractArticlePDF–812K
19.
BGEM: An In Situ Hybridization Database of Gene Expression in the Embryonic and Adult Mouse Nervous System
Susan Magdaleno, Patricia Jensen, Craig L Brumwell, Anna Seal, Karen Lehman, Andrew Asbury, Tony Cheung, Tommie Cornelius, Diana M Batten, Christopher Eden, Shannon M Norland, Dennis S Rice, Nilesh Dosooye, Sundeep Shakya, Perdeep Mehta, Tom Curran
PLoS Biol. 2006 Apr; 4(4): e86. Published online 2006 Mar 28. doi: 10.1371/journal.pbio.0040086
PMCID:
PMC1413568
ArticlePDF–99K
20.
A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain
Adrienne E McKee, Emmanuel Minet, Charlene Stern, Shervin Riahi, Charles D Stiles, Pamela A Silver
BMC Dev Biol. 2005; 5: 14. Published online 2005 Jul 20. doi: 10.1186/1471-213X-5-14
PMCID:
PMC1199591
AbstractArticlePDF–2.0M

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