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Select item 103338841.

Large‐scale phosphomimetic screening identifies phospho‐modulated motif‐based protein interactions

Johanna Kliche, Dimitriya Hristoforova Garvanska, Leandro Simonetti, Dilip Badgujar, Doreen Dobritzsch, Jakob Nilsson, Norman E Davey, Ylva Ivarsson

Mol Syst Biol. 2023 Jul; 19(7): e11164. Published online 2023 May 23. doi: 10.15252/msb.202211164

PMCID:: PMC10333884

Abstract Article PDF–5.0M

Select item 101328052.

Large-scale phage-based screening reveals extensive pan-viral mimicry of host short linear motifs

Filip Mihalič, Leandro Simonetti, Girolamo Giudice, Marie Rubin Sander, Richard Lindqvist, Marie Berit Akpiroro Peters, Caroline Benz, Eszter Kassa, Dilip Badgujar, Raviteja Inturi, Muhammad Ali, Izabella Krystkowiak, Ahmed Sayadi, Eva Andersson, Hanna Aronsson, Ola Söderberg, Doreen Dobritzsch, Evangelia Petsalaki, Anna K. Överby, Per Jemth, Norman E. Davey, Ylva Ivarsson

Nat Commun. 2023; 14: 2409. Published online 2023 Apr 26. doi: 10.1038/s41467-023-38015-5

PMCID:: PMC10132805

Abstract Article PDF–4.2M

Select item 93983993.

Ubiquitin ligase OsRINGzf1 regulates drought resistance by controlling the turnover of OsPIP2;1

Shoujun Chen, Kai Xu, Deyan Kong, Lunying Wu, Qian Chen, Xiaosong Ma, Siqi Ma, Tianfei Li, Qi Xie, Hongyan Liu, Lijun Luo

Plant Biotechnol J. 2022 Sep; 20(9): 1743–1755. Published online 2022 Jun 12. doi: 10.1111/pbi.13857

PMCID:: PMC9398399

Abstract Article PDF–5.4M

Select item 88446144.

环指蛋白11调控Akt信号通路促进BMSCs成骨分化的机制研究

雯邓, 婷龙, 英杜

Zhongguo Xiu Fu Chong Jian Wai Ke Za Zhi. 2022 Jan; 36(1): 102–110. Chinese. doi: 10.7507/1002-1892.202107108

PMCID:: PMC8844614

Abstract Article PDF–9.9M

Select item 87690725.

Proteome‐scale mapping of binding sites in the unstructured regions of the human proteome

Caroline Benz, Muhammad Ali, Izabella Krystkowiak, Leandro Simonetti, Ahmed Sayadi, Filip Mihalic, Johanna Kliche, Eva Andersson, Per Jemth, Norman E Davey, Ylva Ivarsson

Mol Syst Biol. 2022 Jan; 18(1): e10584. Published online 2022 Jan 19. doi: 10.15252/msb.202110584

PMCID:: PMC8769072

Abstract Article PDF–2.9M

Select item 85111556.

Endurance exercise training-responsive miR-19b-3p improves skeletal muscle glucose metabolism

Julie Massart, Rasmus J. O. Sjögren, Brendan Egan, Christian Garde, Magnus Lindgren, Weifeng Gu, Duarte M. S. Ferreira, Mutsumi Katayama, Jorge L. Ruas, Romain Barrès, Donal J. O’Gorman, Juleen R. Zierath, Anna Krook

Nat Commun. 2021; 12: 5948. Published online 2021 Oct 12. doi: 10.1038/s41467-021-26095-0

PMCID:: PMC8511155

Abstract Article PDF–3.3M

Select item 81650307.

Dual Proteome-scale Networks Reveal Cell-specific Remodeling of the Human Interactome

Edward L. Huttlin, Raphael J. Bruckner, Jose Navarrete-Perea, Joe R. Cannon, Kurt Baltier, Fana Gebreab, Melanie P. Gygi, Alexandra Thornock, Gabriela Zarraga, Stanley Tam, John Szpyt, Brandon M. Gassaway, Alexandra Panov, Hannah Parzen, Sipei Fu, Arvene Golbazi, Eila Maenpaa, Keegan Stricker, Sanjukta Guha Thakurta, Tian Zhang, Ramin Rad, Joshua Pan, David P. Nusinow, Joao A. Paulo, Devin K. Schweppe, Laura Pontano Vaites, J. Wade Harper, Steven P. Gygi

Cell. Author manuscript; available in PMC 2022 May 27.

Published in final edited form as: Cell. 2021 May 27; 184(11): 3022–3040.e28. Published online 2021 May 6. doi: 10.1016/j.cell.2021.04.011

PMCID:: PMC8165030

Abstract Article PDF–2.2M

Select item 76976658.

RNF11 at the Crossroads of Protein Ubiquitination

Anna Mattioni, Luisa Castagnoli, Elena Santonico

Biomolecules. 2020 Nov; 10(11): 1538. Published online 2020 Nov 11. doi: 10.3390/biom10111538

PMCID:: PMC7697665

Abstract Article PDF–2.6M

Select item 75861589.

miR-425-5p Acts as a Molecular Marker and Promoted Proliferation, Migration by Targeting RNF11 in Hepatocellular Carcinoma

Dan Rao, Songmei Guan, Junwei Huang, Qing Chang, Shigang Duan

Biomed Res Int. 2020; 2020: 6530973. Published online 2020 Oct 16. doi: 10.1155/2020/6530973

PMCID:: PMC7586158

Abstract Article PDF–1.8M

Select item 716998310.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 674264611.

Extensive disruption of protein interactions by genetic variants across the allele frequency spectrum in human populations

Robert Fragoza, Jishnu Das, Shayne D. Wierbowski, Jin Liang, Tina N. Tran, Siqi Liang, Juan F. Beltran, Christen A. Rivera-Erick, Kaixiong Ye, Ting-Yi Wang, Li Yao, Matthew Mort, Peter D. Stenson, David N. Cooper, Xiaomu Wei, Alon Keinan, John C. Schimenti, Andrew G. Clark, Haiyuan Yu

Nat Commun. 2019; 10: 4141. Published online 2019 Sep 12. doi: 10.1038/s41467-019-11959-3

PMCID:: PMC6742646

Abstract Article PDF–1.2M

Select item 553161112.

Architecture of the human interactome defines protein communities and disease networks

Edward L. Huttlin, Raphael J. Bruckner, Joao A. Paulo, Joe R. Cannon, Lily Ting, Kurt Baltier, Greg Colby, Fana Gebreab, Melanie P. Gygi, Hannah Parzen, John Szpyt, Stanley Tam, Gabriela Zarraga, Laura Pontano-Vaites, Sharan Swarup, Anne E. White, Devin K. Schweppe, Ramin Rad, Brian K. Erickson, Robert A. Obar, K.G. Guruharsha, Kejie Li, Spyros Artavanis-Tsakonas, Steven P. Gygi, J. Wade Harper

Nature. Author manuscript; available in PMC 2017 Nov 17.

Published in final edited form as: Nature. 2017 May 25; 545(7655): 505–509. Published online 2017 May 17. doi: 10.1038/nature22366

PMCID:: PMC5531611

Abstract Article PDF–2.7M

Select item 541804413.

RNF11 sequestration of the E3 ligase SMURF2 on membranes antagonizes SMAD7 down-regulation of transforming growth factor β signaling

Ryan J. Malonis, Wenxiang Fu, Mark J. Jelcic, Marae Thompson, Brian S. Canter, Mary Tsikitis, Francisco J. Esteva, Irma Sánchez

J Biol Chem. 2017 May 5; 292(18): 7435–7451. Published online 2017 Mar 14. doi: 10.1074/jbc.M117.783662

PMCID:: PMC5418044

Abstract Article PDF–2.7M

Select item 511993414.

The endosomal transcriptional regulator RNF11 integrates degradation and transport of EGFR

Sandra Scharaw, Murat Iskar, Alessandro Ori, Gaelle Boncompain, Vibor Laketa, Ina Poser, Emma Lundberg, Franck Perez, Martin Beck, Peer Bork, Rainer Pepperkok

J Cell Biol. 2016 Nov 21; 215(4): 543–558. doi: 10.1083/jcb.201601090

PMCID:: PMC5119934

Abstract Article PDF–3.6M

Select item 387963015.

Protein Microarray Characterization of the S-Nitrosoproteome

Yun-Il Lee, Daniel Giovinazzo, Ho Chul Kang, Yunjong Lee, Jun Seop Jeong, Paschalis-Thomas Doulias, Zhi Xie, Jianfei Hu, Mehdi Ghasemi, Harry Ischiropoulos, Jiang Qian, Heng Zhu, Seth Blackshaw, Valina L. Dawson, Ted M. Dawson

Mol Cell Proteomics. 2014 Jan; 13(1): 63–72. Published online 2013 Oct 8. doi: 10.1074/mcp.M113.032235

PMCID:: PMC3879630

Abstract Article PDF–1.9M

Select item 369978516.

NF-κB activity is inversely correlated to RNF11 expression in Parkinson’s disease

Elaine Pranski, Carson .D. Van Sanford, Nirjari Dalal, Adam L. Orr, Dipan Karmali, Deborah S Cooper, Marla Gearing, James J. Lah, Allan I. Levey, Ranjita Betarbet

Neurosci Lett. Author manuscript; available in PMC 2014 Jun 28.

Published in final edited form as: Neurosci Lett. 2013 Jun 28; 547: 16–20. Published online 2013 May 10. doi: 10.1016/j.neulet.2013.04.056

PMCID:: PMC3699785

Abstract Article PDF–1.3M

Select item 367816317.

RNF111/Arkadia is a SUMO-targeted ubiquitin ligase that facilitates the DNA damage response

Sara L. Poulsen, Rebecca K. Hansen, Sebastian A. Wagner, Loes van Cuijk, Gijsbert J. van Belle, Werner Streicher, Mats Wikström, Chunaram Choudhary, Adriaan B. Houtsmuller, Jurgen A. Marteijn, Simon Bekker-Jensen, Niels Mailand

J Cell Biol. 2013 Jun 10; 201(6): 797–807. doi: 10.1083/jcb.201212075

PMCID:: PMC3678163

Abstract Article PDF–2.7M

Select item 361021418.

A human skeletal muscle interactome centered on proteins involved in muscular dystrophies: LGMD interactome

Gaëlle Blandin, Sylvie Marchand, Karine Charton, Nathalie Danièle, Evelyne Gicquel, Jean-Baptiste Boucheteil, Azéddine Bentaib, Laetitia Barrault, Daniel Stockholm, Marc Bartoli, Isabelle Richard

Skelet Muscle. 2013; 3: 3. Published online 2013 Feb 15. doi: 10.1186/2044-5040-3-3

PMCID:: PMC3610214

Abstract Article PDF–1.7M

Select item 353874619.

RING Finger Protein 11 Targets TBK1/IKKi Kinases to Inhibit Antiviral Signaling

Soratree Charoenthongtrakul, Linlin Gao, Kislay Parvatiyar, David Lee, Edward W. Harhaj

PLoS One. 2013; 8(1): e53717. Published online 2013 Jan 7. doi: 10.1371/journal.pone.0053717

PMCID:: PMC3538746

Abstract Article PDF–1.4M

Select item 347867920.

RNF11 modulates microglia activation through NF-κB signalling cascade

Nirjari V. Dalal, Elaine L. Pranski, Malu G. Tansey, James J. Lah, Allan I. Levey, Ranjita S. Betarbet

Neurosci Lett. Author manuscript; available in PMC 2013 Oct 24.

Published in final edited form as: Neurosci Lett. 2012 Oct 24; 528(2): 174–179. Published online 2012 Sep 11. doi: 10.1016/j.neulet.2012.08.060

PMCID:: PMC3478679

Abstract Article PDF–654K

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