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Items: 1 to 20 of 23

1.
DNA methylation status of the SPHK1 and LTB genes underlies the clinicopathological diversity of non-alcoholic steatohepatitis-related hepatocellular carcinomas
Noboru Tsuda, Ying Tian, Mao Fujimoto, Junko Kuramoto, Satomi Makiuchi, Hidenori Ojima, Masahiro Gotoh, Nobuyoshi Hiraoka, Teruhiko Yoshida, Yae Kanai, Eri Arai
J Cancer Res Clin Oncol. 2023; 149(8): 5109–5125. Published online 2022 Nov 8. doi: 10.1007/s00432-022-04445-9
PMCID:
PMC10349775
AbstractArticlePDF–4.0M
2.
Gastrointestinal Symptom Cluster is Associated With Epigenetic Regulation of Lymphotoxin Beta in Oncology Patients Receiving Chemotherapy
Carolyn S. Harris, Christine A. Miaskowski, Yvette P. Conley, Marilyn J. Hammer, Anand A. Dhruva, Jon D. Levine, Adam B. Olshen, Kord M. Kober
Biol Res Nurs. 2023 Jan; 25(1): 51–64. Published online 2022 Aug 5. doi: 10.1177/10998004221115863
PMCID:
PMC9900252
AbstractArticlePDF–844K
3.
A lymphotoxin-driven pathway to hepatocellular carcinoma
Johannes Haybaeck, Nicolas Zeller, Monika Julia Wolf, Achim Weber, Ulrich Wagner, Michael O do Kurrer, Juliane Bremer, Giandomenica Iezzi, Rolf Graf, Pierre-Alain Clavien, Robert Thimme, Hubert Blum, Sergei A. Nedospasov, Kurt Zatloukal, Muhammad Ramzan, Sandra Ciesek, Thomas Pietschmann, Patrice N. Marche, Michael Karin, Manfred Kopf, Jeffrey L. Browning, Adriano Aguzzi, Mathias Heikenwalder
Cancer Cell. Author manuscript; available in PMC 2015 May 6.
Published in final edited form as: Cancer Cell. 2009 Oct 6; 16(4): 295–308. doi: 10.1016/j.ccr.2009.08.021
Correction in:
volume 16 on page 447
PMCID:
PMC4422166
AbstractArticlePDF–3.9M
4.
Identification of Candidate Loci at 6p21 and 21q22 in a Genome-Wide Association Study of Cardiac Manifestations of Neonatal Lupus
Robert M. Clancy, Miranda C. Marion, Kenneth M. Kaufman, Paula S. Ramos, Adam Adler, the International Consortium on Systemic Lupus Erythematosus Genetics, John B. Harley, Carl D. Langefeld, Jill P. Buyon
Arthritis Rheum. Author manuscript; available in PMC 2013 Mar 11.
Published in final edited form as: Arthritis Rheum. 2010 Nov; 62(11): 3415–3424. doi: 10.1002/art.27658
PMCID:
PMC3593718
AbstractArticlePDF–1.5M
5.
Meta-Analysis Increases to 71 the Tally of Confirmed Crohn’s Disease Susceptibility Loci
Andre Franke, Dermot P.B. McGovern, Jeffrey C. Barrett, Kai Wang, Graham L. Radford-Smith, Tariq Ahmad, Charlie W. Lees, Tobias Balschun, James Lee, Rebecca Roberts, Carl A. Anderson, Joshua C. Bis, Suzanne Bumpstead, David Ellinghaus, Eleonora M. Festen, Michel Georges, Talin Haritunians, Luke Jostins, Anna Latiano, Christopher G. Mathew, Grant W. Montgomery, Natalie J. Prescott, Jerome I. Rotter, Philip Schumm, Yashoda Sharma, Lisa A. Simms, Kent D. Taylor, David Whiteman, Cisca Wijmenga, Robert N. Baldassano, Murray Barclay, Theodore M. Bayless, Stephan Brand, Carsten Buning, Albert Cohen, Jean-Frederick Colombel, Mario Cottone, Laura Stronati, Ted Denson, Martine De Vos, Renata D’Inca, Marla Dubinsky, Cathryn Edwards, Tim Florin, Denis Franchimont, Richard Gearry, Jürgen Glas, Andre Van Gossum, Stephen L. Guthery, Jonas Halfvarson, Daan Hommes, Jean-Pierre Hugot, Debby Laukens, Ian Lawrance, Marc Lemann, Arie Levine, Cecile Libioulle, Edouard Louis, Craig Mowat, William Newman, Julián Panés, Anne Phillips, Deborah D. Proctor, Miguel Regueiro, Paul Rutgeerts, Jeremy Sanderson, Miquel Sans, Frank Seibold, A. Hillary Steinhart, Pieter C.F. Stokkers, Leif Torkvist, Gerd Kullak Ublick, Soumya Raychaudhuri, Todd Green, Thomas Walters, Stephan R. Targan, Steven R. Brant, John D. Rioux, Mauro D’Amato, Rinse Weersma, Subra Kugathasan, Anne M. Griffiths, John C. Mansfield, Severine Vermeire, Richard H. Duerr, Mark S. Silverberg, Jack Satsangi, Stefan Schreiber, Judy H. Cho, Vito Annese, Hakon Hakonarson, Mark J. Daly, Miles Parkes
Nat Genet. Author manuscript; available in PMC 2012 Mar 12.
Published in final edited form as: Nat Genet. 2010 Dec; 42(12): 1118–1125. doi: 10.1038/ng.717
PMCID:
PMC3299551
ArticlePDF–864K
6.
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium
Pascale Gaudet, Michael S. Livstone, Suzanna E. Lewis, Paul D. Thomas
Brief Bioinform. 2011 Sep; 12(5): 449–462. Published online 2011 Aug 27. doi: 10.1093/bib/bbr042
PMCID:
PMC3178059
AbstractArticlePDF–1.0M
7.
Transcriptional repression and DNA looping associated with a novel regulatory element in the final exon of the lymphotoxin-β gene
K Wicks, J C Knight
Genes Immun. 2011 Mar; 12(2): 126–135. Published online 2011 Jan 20. doi: 10.1038/gene.2010.62
PMCID:
PMC3049238
AbstractArticlePDF–1.2M
8.
A study of the TNF/LTA/LTB locus and susceptibility to severe malaria in highland papuan children and adults
Louise M Randall, Enny Kenangalem, Daniel A Lampah, Emiliana Tjitra, Esther D Mwaikambo, Tjandra Handojo, Kim A Piera, Zhen Z Zhao, Fabian de Labastida Rivera, Yonghong Zhou, Karli M McSweeney, Lien Le, Fiona H Amante, Ashraful Haque, Amanda C Stanley, Tonia Woodberry, Ervi Salwati, Donald L Granger, Maurine R Hobbs, Ric N Price, J Brice Weinberg, Grant W Montgomery, Nicholas M Anstey, Christian R Engwerda
Malar J. 2010; 9: 302. Published online 2010 Oct 29. doi: 10.1186/1475-2875-9-302
PMCID:
PMC2978234
AbstractArticlePDF–528K
9.
Variation at the NFATC2 Locus Increases the Risk of Thiazolidinedione-Induced Edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) Study
Swneke D. Bailey, Changchun Xie, Ron Do, Alexandre Montpetit, Rafael Diaz, Viswanathan Mohan, Bernard Keavney, Salim Yusuf, Hertzel C. Gerstein, James C. Engert, Sonia Anand, on behalf of the DREAM investigators
Diabetes Care. 2010 Oct; 33(10): 2250–2253. Published online 2010 Jul 13. doi: 10.2337/dc10-0452
PMCID:
PMC2945168
AbstractArticlePDF–153K
10.
An Integrative Predictive Model of Coronary Artery Calcification in Arteriosclerosis
Michael McGeachie, Rachel L Badovinac Ramoni, Josyf C. Mychaleckyj, Karen L Furie, Jonathan M. Dreyfuss, Yongmei Liu, David Herrington, Xiuqing Guo, João A. Lima, Wendy Post, Jerome I. Rotter, Stephen Rich, Michèle Sale, Marco F. Ramoni
Circulation. Author manuscript; available in PMC 2010 Dec 15.
Published in final edited form as: Circulation. 2009 Dec 15; 120(24): 2448–2454. doi: 10.1161/CIRCULATIONAHA.109.865501
PMCID:
PMC2810344
AbstractArticlePDF–448K
11.
Candidate Gene Polymorphisms for Ischemic Stroke
Mar Matarin, W. Mark Brown, Hernandez Dena, Angela Britton, Fabienne Wavrant De Vrieze, Thomas G. Brott, Robert D. Brown, Jr, Bradford B. Worrall, L. Douglas Case, Stephen J. Chanock, E. Jeffrey Metter, Luigi Ferruci, Dale Gamble, John A. Hardy, Stephen S. Rich, Andrew Singleton, James F. Meschia
Stroke. Author manuscript; available in PMC 2009 Nov 26.
Published in final edited form as: Stroke. 2009 Nov; 40(11): 3436–3442. Published online 2009 Sep 3. doi: 10.1161/STROKEAHA.109.558015
PMCID:
PMC2784015
AbstractArticlePDF–214K
12.
Gene-centric Association Signals for Lipids and Apolipoproteins Identified via the HumanCVD BeadChip
Philippa J. Talmud, Fotios Drenos, Sonia Shah, Tina Shah, Jutta Palmen, Claudio Verzilli, Tom R. Gaunt, Jacky Pallas, Ruth Lovering, Kawah Li, Juan Pablo Casas, Reecha Sofat, Meena Kumari, Santiago Rodriguez, Toby Johnson, Stephen J. Newhouse, Anna Dominiczak, Nilesh J. Samani, Mark Caulfield, Peter Sever, Alice Stanton, Denis C. Shields, on behalf of the ASCOT investigators, Sandosh Padmanabhan, Olle Melander, Claire Hastie, Christian Delles, on behalf of the NORDIL investigators, Shah Ebrahim, Michael G. Marmot, George Davey Smith, Debbie A. Lawlor, Patricia B. Munroe, for the BRIGHT Consortium, Ian N. Day, Mika Kivimaki, John Whittaker, Steve E. Humphries, Aroon D. Hingorani
Am J Hum Genet. 2009 Nov 13; 85(5): 628–642. doi: 10.1016/j.ajhg.2009.10.014
PMCID:
PMC2775832
AbstractArticlePDF–2.8M
13.
High-Density SNP Screening of the Major Histocompatibility Complex in Systemic Lupus Erythematosus Demonstrates Strong Evidence for Independent Susceptibility Regions
Lisa F. Barcellos, Suzanne L. May, Patricia P. Ramsay, Hong L. Quach, Julie A. Lane, Joanne Nititham, Janelle A. Noble, Kimberly E. Taylor, Diana L. Quach, Sharon A. Chung, Jennifer A. Kelly, Kathy L. Moser, Timothy W. Behrens, Michael F. Seldin, Glenys Thomson, John B. Harley, Patrick M. Gaffney, Lindsey A. Criswell
PLoS Genet. 2009 Oct; 5(10): e1000696. Published online 2009 Oct 23. doi: 10.1371/journal.pgen.1000696
PMCID:
PMC2758598
AbstractArticlePDF–323K
14.
Blockade of lymphotoxin-beta receptor signaling reduces aspects of Sjögren's syndrome in salivary glands of non-obese diabetic mice
Margaret K Gatumu, Kathrine Skarstein, Adrian Papandile, Jeffrey L Browning, Roy A Fava, Anne Isine Bolstad
Arthritis Res Ther. 2009; 11(1): R24. Published online 2009 Feb 18. doi: 10.1186/ar2617
PMCID:
PMC2688257
AbstractArticlePDF–4.5M
15.
Lymphotoxin-α1β2 and LIGHT Induce Classical and Noncanonical NF-κB-Dependent Proinflammatory Gene Expression in Vascular Endothelial Cells
Lisa A. Madge, Martin S. Kluger, Jordan S. Orange, Michael J. May
J Immunol. Author manuscript; available in PMC 2009 Mar 1.
Published in final edited form as: J Immunol. 2008 Mar 1; 180(5): 3467–3477. doi: 10.4049/jimmunol.180.5.3467
PMCID:
PMC2596750
AbstractArticlePDF–2.4M
16.
Variation in inflammation-related genes and risk of incident nonfatal myocardial infarction or ischemic stroke
Joshua C. Bis, Susan R. Heckbert, Nicholas L. Smith, Alexander P. Reiner, Kenneth Rice, Thomas Lumley, Lucia Hindorff, Kristin D. Marciante, Daniel Enquobahrie, Stephanie A. Monks, Bruce M. Psaty
Atherosclerosis. Author manuscript; available in PMC 2009 May 1.
Published in final edited form as: Atherosclerosis. 2008 May; 198(1): 166–173. Published online 2007 Nov 5. doi: 10.1016/j.atherosclerosis.2007.09.031
PMCID:
PMC2517173
AbstractArticlePDF–324K
17.
Polymorphic structure of the tumor necrosis factor (TNF) locus: an NcoI polymorphism in the first intron of the human TNF-beta gene correlates with a variant amino acid in position 26 and a reduced level of TNF- beta production
J Exp Med. 1991 Jan 1; 173(1): 209–219. doi: 10.1084/jem.173.1.209
PMCID:
PMC2118757
SummaryPDF–1.3M
18.
Rapid Evolution of Major Histocompatibility Complex Class I Genes in Primates Generates New Disease Alleles in Humans via Hitchhiking Diversity
Takashi Shiina, Masao Ota, Sayoko Shimizu, Yoshihiko Katsuyama, Nami Hashimoto, Miwa Takasu, Tatsuya Anzai, Jerzy K. Kulski, Eri Kikkawa, Taeko Naruse, Natsuki Kimura, Kazuyo Yanagiya, Atsushi Watanabe, Kazuyoshi Hosomichi, Sakae Kohara, Chie Iwamoto, Yumi Umehara, Alice Meyer, Valérie Wanner, Kazumi Sano, Cécile Macquin, Kazuho Ikeo, Katsushi Tokunaga, Takashi Gojobori, Hidetoshi Inoko, Seiamak Bahram
Genetics. 2006 Jul; 173(3): 1555–1570. doi: 10.1534/genetics.106.057034
PMCID:
PMC1526686
AbstractArticlePDF–1.1M
19.
Proliferative activity of extracellular HIV-1 Tat protein in human epithelial cells: expression profile of pathogenetically relevant genes
Alessia A Bettaccini, Andreina Baj, Roberto S Accolla, Fulvio Basolo, Antonio Q Toniolo
BMC Microbiol. 2005; 5: 20. Published online 2005 Apr 27. doi: 10.1186/1471-2180-5-20
PMCID:
PMC1090582
AbstractArticlePDF–428K
20.
The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)
Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504
Correction in:
Genome Res. 2006 Jun; 16(6): 804.
PMCID:
PMC528928
AbstractArticlePDF–140K

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