PMC Links for GEO Profiles (Select 66721473) - PMC

Select item 92098111.

New data and collaborations at the Saccharomyces Genome Database: updated reference genome, alleles, and the Alliance of Genome Resources

Stacia R Engel, Edith D Wong, Robert S Nash, Suzi Aleksander, Micheal Alexander, Eric Douglass, Kalpana Karra, Stuart R Miyasato, Matt Simison, Marek S Skrzypek, Shuai Weng, J Michael Cherry

Genetics. 2022 Apr; 220(4): iyab224. Published online 2021 Dec 13. doi: 10.1093/genetics/iyab224

PMCID:: PMC9209811

Abstract Article PDF–818K

Select item 67534712.

Rad5 dysregulation drives hyperactive recombination at replication forks resulting in cisplatin sensitivity and genome instability

Eric E Bryant, Ivana Šunjevarić, Luke Berchowitz, Rodney Rothstein, Robert J D Reid

Nucleic Acids Res. 2019 Sep 26; 47(17): 9144–9159. Published online 2019 Jul 27. doi: 10.1093/nar/gkz631

PMCID:: PMC6753471

Abstract Article PDF–6.0M

Select item 56618853.

A global interaction network maps a wiring diagram of cellular function

Michael Costanzo, Benjamin VanderSluis, Elizabeth N. Koch, Anastasia Baryshnikova, Carles Pons, Guihong Tan, Wen Wang, Matej Usaj, Julia Hanchard, Susan D. Lee, Vicent Pelechano, Erin B. Styles, Maximilian Billmann, Jolanda van Leeuwen, Nydia van Dyk, Zhen-Yuan Lin, Elena Kuzmin, Justin Nelson, Jeff S. Piotrowski, Tharan Srikumar, Sondra Bahr, Yiqun Chen, Raamesh Deshpande, Christoph F. Kurat, Sheena C. Li, Zhijian Li, Mojca Mattiazzi Usaj, Hiroki Okada, Natasha Pascoe, Bryan-Joseph San Luis, Sara Sharifpoor, Emira Shuteriqi, Scott W. Simpkins, Jamie Snider, Harsha Garadi Suresh, Yizhao Tan, Hongwei Zhu, Noel Malod-Dognin, Vuk Janjic, Natasa Przulj, Olga G. Troyanskaya, Igor Stagljar, Tian Xia, Yoshikazu Ohya, Anne-Claude Gingras, Brian Raught, Michael Boutros, Lars M. Steinmetz, Claire L. Moore, Adam P. Rosebrock, Amy A. Caudy, Chad L. Myers, Brenda Andrews, Charles Boone

Science. Author manuscript; available in PMC 2017 Oct 30.

Published in final edited form as: Science. 2016 Sep 23; 353(6306): aaf1420. doi: 10.1126/science.aaf1420

PMCID:: PMC5661885

Abstract Article PDF–2.6M

Select item 50550834.

Functional Metabolomics Describes the Yeast Biosynthetic Regulome

Michael Mülleder, Enrica Calvani, Mohammad Tauqeer Alam, Richard Kangda Wang, Florian Eckerstorfer, Aleksej Zelezniak, Markus Ralser

Cell. 2016 Oct 6; 167(2): 553–565.e12. doi: 10.1016/j.cell.2016.09.007

PMCID:: PMC5055083

Abstract Article PDF–3.9M

Select item 47030125.

Target selection by natural and redesigned PUF proteins

Douglas F. Porter, Yvonne Y. Koh, Brett VanVeller, Ronald T. Raines, Marvin Wickens

Proc Natl Acad Sci U S A. 2015 Dec 29; 112(52): 15868–15873. Published online 2015 Dec 14. doi: 10.1073/pnas.1508501112

PMCID:: PMC4703012

Abstract Article PDF–1.3M

Select item 40363366.

Stress-triggered Activation of the Metalloprotease Oma1 Involves Its C-terminal Region and Is Important for Mitochondrial Stress Protection in Yeast

Iryna Bohovych, Garrett Donaldson, Sara Christianson, Nataliya Zahayko, Oleh Khalimonchuk

J Biol Chem. 2014 May 9; 289(19): 13259–13272. Published online 2014 Mar 19. doi: 10.1074/jbc.M113.542910

PMCID:: PMC4036336

Abstract Article PDF–4.2M

Select item 35379087.

Global Analysis of Yeast mRNPs

Sarah F. Mitchell, Saumya Jain, Meipei She, Roy Parker

Nat Struct Mol Biol. Author manuscript; available in PMC 2013 Jul 1.

Published in final edited form as: Nat Struct Mol Biol. 2013 Jan; 20(1): 127–133. Published online 2012 Dec 9. doi: 10.1038/nsmb.2468

PMCID:: PMC3537908

Abstract Article PDF–1.2M

Select item 34110108.

Oligomerization of Heme o Synthase in Cytochrome Oxidase Biogenesis Is Mediated by Cytochrome Oxidase Assembly Factor Coa2

Oleh Khalimonchuk, Hyung Kim, Talina Watts, Xochitl Perez-Martinez, Dennis R. Winge

J Biol Chem. 2012 Aug 3; 287(32): 26715–26726. Published online 2012 Jun 5. doi: 10.1074/jbc.M112.377200

PMCID:: PMC3411010

Abstract Article PDF–2.8M

Select item 32935539.

Selective Oma1 Protease-mediated Proteolysis of Cox1 Subunit of Cytochrome Oxidase in Assembly Mutants

Oleh Khalimonchuk, Mi-Young Jeong, Talina Watts, Elliott Ferris, Dennis R. Winge

J Biol Chem. 2012 Mar 2; 287(10): 7289–7300. Published online 2012 Jan 4. doi: 10.1074/jbc.M111.313148

PMCID:: PMC3293553

Abstract Article PDF–2.6M

Select item 328593310.

La-motif–dependent mRNA association with Slf1 promotes copper detoxification in yeast

Luca Schenk, Dominik M. Meinel, Katja Strässer, André P. Gerber

RNA. 2012 Mar; 18(3): 449–461. doi: 10.1261/rna.028506.111

PMCID:: PMC3285933

Abstract Article PDF–812K

Select item 293752411.

Analysis of Leigh Syndrome Mutations in the Yeast SURF1 Homolog Reveals a New Member of the Cytochrome Oxidase Assembly Factor Family

Megan Bestwick, Mi-Young Jeong, Oleh Khalimonchuk, Hyung Kim, Dennis R. Winge

Mol Cell Biol. 2010 Sep; 30(18): 4480–4491. Published online 2010 Jul 12. doi: 10.1128/MCB.00228-10

PMCID:: PMC2937524

Abstract Article PDF–2.0M

Select item 279828312.

The Role of Coa2 in Hemylation of Yeast Cox1 Revealed by Its Genetic Interaction with Cox10

Megan Bestwick, Oleh Khalimonchuk, Fabien Pierrel, Dennis R. Winge

Mol Cell Biol. 2010 Jan; 30(1): 172–185. Published online 2009 Oct 19. doi: 10.1128/MCB.00869-09

PMCID:: PMC2798283

Abstract Article PDF–2.9M

Select item 278735313.

Purification of Nuclear Poly(A)-binding Protein Nab2 Reveals Association with the Yeast Transcriptome and a Messenger Ribonucleoprotein Core Structure

Julien Batisse, Claire Batisse, Aidan Budd, Bettina Böttcher, Ed Hurt

J Biol Chem. 2009 Dec 11; 284(50): 34911–34917. Published online 2009 Oct 19. doi: 10.1074/jbc.M109.062034

PMCID:: PMC2787353

Abstract Article PDF–3.8M

Select item 251970114.

Coa2 Is an Assembly Factor for Yeast Cytochrome c Oxidase Biogenesis That Facilitates the Maturation of Cox1

Fabien Pierrel, Oleh Khalimonchuk, Paul A. Cobine, Megan Bestwick, Dennis R. Winge

Mol Cell Biol. 2008 Aug; 28(16): 4927–4939. Published online 2008 Jun 9. doi: 10.1128/MCB.00057-08

PMCID:: PMC2519701

Abstract Article PDF–1.5M

Select item 141521415.

Functional genomics of genes with small open reading frames (sORFs) in S. cerevisiae

James P. Kastenmayer, Li Ni, Angela Chu, Lauren E. Kitchen, Wei-Chun Au, Hui Yang, Carole D. Carter, David Wheeler, Ronald W. Davis, Jef D. Boeke, Michael A. Snyder, Munira A. Basrai

Genome Res. 2006 Mar; 16(3): 365–373. doi: 10.1101/gr.4355406

PMCID:: PMC1415214

Abstract Article PDF–466K

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