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Select item 109332671.

Interaction network of human early embryonic transcription factors

Lisa Gawriyski, Zenglai Tan, Xiaonan Liu, Iftekhar Chowdhury, Dicle Malaymar Pinar, Qin Zhang, Jere Weltner, Eeva-Mari Jouhilahti, Gong-Hong Wei, Juha Kere, Markku Varjosalo

EMBO Rep. 2024 Mar; 25(3): 1589–1622. Published online 2024 Jan 31. doi: 10.1038/s44319-024-00074-0

PMCID:: PMC10933267

Abstract Article PDF–2.9M

Select item 104352592.

Pan-cancer analysis of Krüppel-like factor 3 and its carcinogenesis in pancreatic cancer

Jinfeng Zhu, Hong Teng, Xiaojian Zhu, Jingxuan Yuan, Qiong Zhang, Yeqing Zou

Front Immunol. 2023; 14: 1167018. Published online 2023 Aug 3. doi: 10.3389/fimmu.2023.1167018

PMCID:: PMC10435259

Abstract Article PDF–55M

Select item 93433183.

microRNA-21-5p from M2 macrophage-derived extracellular vesicles promotes the differentiation and activity of pancreatic cancer stem cells by mediating KLF3

Jian Chang, Hanjun Li, Zhongchao Zhu, Pei Mei, Weimin Hu, Xingcheng Xiong, Jing Tao

Cell Biol Toxicol. 2022; 38(4): 577–590. Published online 2021 Mar 17. doi: 10.1007/s10565-021-09597-x

PMCID:: PMC9343318

Abstract Article PDF–2.2M

Select item 93106484.

Bone mesenchymal stem cells (BMSCs)-derived exosomal microRNA-21-5p regulates Kruppel-like factor 3 (KLF3) to promote osteoblast proliferation in vitro

Murong You, Zisheng Ai, Jihuan Zeng, Yang Fu, Liang Zhang, Xin Wu

Bioengineered. 2022; 13(5): 11933–11944. Published online 2022 May 13. doi: 10.1080/21655979.2022.2067286

PMCID:: PMC9310648

Abstract Article PDF–8.9M

Select item 91618505.

Fat mass and obesity associated (FTO)-mediated N6-methyladenosine modification of Krüppel-like factor 3 (KLF3) promotes osteosarcoma progression

Hong-Jian Shan, Wen-Xiang Gu, Gang Duan, Hong-Liang Chen

Bioengineered. 2022; 13(4): 8038–8050. Published online 2022 Mar 21. doi: 10.1080/21655979.2022.2051785

PMCID:: PMC9161850

Abstract Article PDF–3.0M

Select item 88288956.

Human transcription factor protein interaction networks

Helka Göös, Matias Kinnunen, Kari Salokas, Zenglai Tan, Xiaonan Liu, Leena Yadav, Qin Zhang, Gong-Hong Wei, Markku Varjosalo

Nat Commun. 2022; 13: 766. Published online 2022 Feb 9. doi: 10.1038/s41467-022-28341-5

PMCID:: PMC8828895

Abstract Article PDF–1.7M

Select item 80090487.

Impact of cytosine methylation on DNA binding specificities of human transcription factors

Yimeng Yin, Ekaterina Morgunova, Arttu Jolma, Eevi Kaasinen, Biswajyoti Sahu, Syed Khund-Sayeed, Pratyush K. Das, Teemu Kivioja, Kashyap Dave, Fan Zhong, Kazuhiro R. Nitta, Minna Taipale, Alexander Popov, Paul A. Ginno, Silvia Domcke, Jian Yan, Dirk Schübeler, Charles Vinson, Jussi Taipale

Science. Author manuscript; available in PMC 2021 Mar 30.

Published in final edited form as: Science. 2017 May 5; 356(6337): eaaj2239. doi: 10.1126/science.aaj2239

PMCID:: PMC8009048

Abstract Article PDF–2.6M

Select item 78032928.

Unravelling Structure, Localization, and Genetic Crosstalk of KLF3 in Human Breast Cancer

Khushbukhat Khan, Sadia Safi, Asma Abbas, Yasmin Badshah, Erum Dilshad, Mehak Rafiq, Kainat Zahra, Maria Shabbir

Biomed Res Int. 2020; 2020: 1354381. Published online 2020 Dec 28. doi: 10.1155/2020/1354381

PMCID:: PMC7803292

Abstract Article PDF–2.0M

Select item 71699839.

A reference map of the human binary protein interactome

Katja Luck, Dae-Kyum Kim, Luke Lambourne, Kerstin Spirohn, Bridget E. Begg, Wenting Bian, Ruth Brignall, Tiziana Cafarelli, Francisco J. Campos-Laborie, Benoit Charloteaux, Dongsic Choi, Atina G. Coté, Meaghan Daley, Steven Deimling, Alice Desbuleux, Amélie Dricot, Marinella Gebbia, Madeleine F. Hardy, Nishka Kishore, Jennifer J. Knapp, István A. Kovács, Irma Lemmens, Miles W. Mee, Joseph C. Mellor, Carl Pollis, Carles Pons, Aaron D. Richardson, Sadie Schlabach, Bridget Teeking, Anupama Yadav, Mariana Babor, Dawit Balcha, Omer Basha, Christian Bowman-Colin, Suet-Feung Chin, Soon Gang Choi, Claudia Colabella, Georges Coppin, Cassandra D’Amata, David De Ridder, Steffi De Rouck, Miquel Duran-Frigola, Hanane Ennajdaoui, Florian Goebels, Liana Goehring, Anjali Gopal, Ghazal Haddad, Elodie Hatchi, Mohamed Helmy, Yves Jacob, Yoseph Kassa, Serena Landini, Roujia Li, Natascha van Lieshout, Andrew MacWilliams, Dylan Markey, Joseph N. Paulson, Sudharshan Rangarajan, John Rasla, Ashyad Rayhan, Thomas Rolland, Adriana San-Miguel, Yun Shen, Dayag Sheykhkarimli, Gloria M. Sheynkman, Eyal Simonovsky, Murat Taşan, Alexander Tejeda, Vincent Tropepe, Jean-Claude Twizere, Yang Wang, Robert J. Weatheritt, Jochen Weile, Yu Xia, Xinping Yang, Esti Yeger-Lotem, Quan Zhong, Patrick Aloy, Gary D. Bader, Javier De Las Rivas, Suzanne Gaudet, Tong Hao, Janusz Rak, Jan Tavernier, David E. Hill, Marc Vidal, Frederick P. Roth, Michael A. Calderwood

Nature. Author manuscript; available in PMC 2020 Oct 8.

Published in final edited form as: Nature. 2020 Apr; 580(7803): 402–408. Published online 2020 Apr 8. doi: 10.1038/s41586-020-2188-x

PMCID:: PMC7169983

Abstract Article PDF–5.4M

Select item 716309610.

Expression of human Krüppel‐like factor 3 in peripheral blood as a promising biomarker for acute leukemia

Miao Yan, Huihui Liu, Junhui Xu, Xinan Cen, Qian Wang, Weilin Xu, Wensheng Wang, Zhixiang Qiu, Jinping Ou, Yujun Dong, Ping Zhu, Hanyun Ren, Fuchu He, Mangju Wang

Cancer Med. 2020 Apr; 9(8): 2803–2811. Published online 2020 Feb 26. doi: 10.1002/cam4.2911

PMCID:: PMC7163096

Abstract Article PDF–725K

Select item 685257911.

KLF3 is a crucial regulator of metastasis by controlling STAT3 expression in lung cancer

Wei Sun, Shan Hu, Yukun Zu, Yu Deng

Mol Carcinog. 2019 Nov; 58(11): 1933–1945. Published online 2019 Sep 5. doi: 10.1002/mc.23072

PMCID:: PMC6852579

Abstract Article PDF–5.8M

Select item 649596712.

MiR‐326/Sp1/KLF3: A novel regulatory axis in lung cancer progression

Rong Wang, Jiali Xu, Jing Xu, Wei Zhu, Tianzhu Qiu, Jun Li, Meiling Zhang, Qianqian Wang, Tongpeng Xu, Renhua Guo, Kaihua Lu, Yongmei Yin, Yanhong Gu, Lingjun Zhu, Puwen Huang, Ping Liu, Lianke Liu, Wei De, Yongqian Shu

Cell Prolif. 2019 Mar; 52(2): e12551. Published online 2018 Nov 28. doi: 10.1111/cpr.12551

PMCID:: PMC6495967

Abstract Article PDF–1.9M

Select item 613866013.

rec-YnH enables simultaneous many-by-many detection of direct protein–protein and protein–RNA interactions

Jae-Seong Yang, Mireia Garriga-Canut, Nele Link, Carlo Carolis, Katrina Broadbent, Violeta Beltran-Sastre, Luis Serrano, Sebastian P. Maurer

Nat Commun. 2018; 9: 3747. Published online 2018 Sep 14. doi: 10.1038/s41467-018-06128-x

PMCID:: PMC6138660

Abstract Article PDF–1.9M

Select item 567858114.

RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination

Nila Roy Choudhury, Gregory Heikel, Maryia Trubitsyna, Peter Kubik, Jakub Stanislaw Nowak, Shaun Webb, Sander Granneman, Christos Spanos, Juri Rappsilber, Alfredo Castello, Gracjan Michlewski

BMC Biol. 2017; 15: 105. Published online 2017 Nov 8. doi: 10.1186/s12915-017-0444-9

PMCID:: PMC5678581

Abstract Article PDF–3.2M

Select item 540063915.

RNA sequencing analysis reveals protective role of kruppel-like factor 3 in colorectal cancer

Xiaohong Wang, Zhonghua Jiang, Yu Zhang, Xiang Wang, Li Liu, Zhining Fan

Oncotarget. 2017 Mar 28; 8(13): 21984–21993. Published online 2017 Feb 28. doi: 10.18632/oncotarget.15766

PMCID:: PMC5400639

Abstract Article PDF–4.3M

Select item 484876216.

Pooled‐matrix protein interaction screens using Barcode Fusion Genetics

Nozomu Yachie, Evangelia Petsalaki, Joseph C Mellor, Jochen Weile, Yves Jacob, Marta Verby, Sedide B Ozturk, Siyang Li, Atina G Cote, Roberto Mosca, Jennifer J Knapp, Minjeong Ko, Analyn Yu, Marinella Gebbia, Nidhi Sahni, Song Yi, Tanya Tyagi, Dayag Sheykhkarimli, Jonathan F Roth, Cassandra Wong, Louai Musa, Jamie Snider, Yi‐Chun Liu, Haiyuan Yu, Pascal Braun, Igor Stagljar, Tong Hao, Michael A Calderwood, Laurence Pelletier, Patrick Aloy, David E Hill, Marc Vidal, Frederick P Roth

Mol Syst Biol. 2016 Apr; 12(4): 863. Published online 2016 Apr 23. doi: 10.15252/msb.20156660

PMCID:: PMC4848762

Abstract Article PDF–2.8M

Select item 464794117.

hORFeome v3.1: A resource of human open reading frames representing over 10,000 human genes

Philippe Lamesch, Ning Li, Stuart Milstein, Changyu Fan, Tong Hao, Gabor Szabo, Zhenjun Hu, Kavitha Venkatesan, Graeme Bethel, Paul Martin, Jane Rogers, Stephanie Lawlor, Stuart McLaren, Amélie Dricot, Heather Borick, Michael E. Cusick, Jean Vandenhaute, Ian Dunham, David E. Hill, Marc Vidal

Genomics. 2007 Mar; 89(3): 307–315. doi: 10.1016/j.ygeno.2006.11.012

PMCID:: PMC4647941

Abstract Article

Select item 460067518.

Epigenetic silencing of Kruppel like factor-3 increases expression of pro-metastatic miR-182

Mohit Sachdeva, Rebecca D. Dodd, Zhiqing Huang, Carole Grenier, Yan Ma, Dina C. Lev, Diana M. Cardona, Susan K. Murphy, David G. Kirsch

Cancer Lett. Author manuscript; available in PMC 2016 Dec 1.

Published in final edited form as: Cancer Lett. 2015 Dec 1; 369(1): 202–211. Published online 2015 Aug 24. doi: 10.1016/j.canlet.2015.08.016

PMCID:: PMC4600675

Abstract Article PDF–670K

Select item 459214719.

The Role of Epigenetics in the Endothelial Cell Shear Stress Response and Atherosclerosis

Jessilyn Dunn, Rachel Simmons, Salim Thabet, Hanjoong Jo

Int J Biochem Cell Biol. Author manuscript; available in PMC 2016 Oct 1.

Published in final edited form as: Int J Biochem Cell Biol. 2015 Oct; 67: 167–176. Published online 2015 May 13. doi: 10.1016/j.biocel.2015.05.001

PMCID:: PMC4592147

Abstract Article PDF–2.3M

Select item 426658820.

A proteome-scale map of the human interactome network

Thomas Rolland, Murat Taşan, Benoit Charloteaux, Samuel J. Pevzner, Quan Zhong, Nidhi Sahni, Song Yi, Irma Lemmens, Celia Fontanillo, Roberto Mosca, Atanas Kamburov, Susan D. Ghiassian, Xinping Yang, Lila Ghamsari, Dawit Balcha, Bridget E. Begg, Pascal Braun, Marc Brehme, Martin P. Broly, Anne-Ruxandra Carvunis, Dan Convery-Zupan, Roser Corominas, Jasmin Coulombe-Huntington, Elizabeth Dann, Matija Dreze, Amélie Dricot, Changyu Fan, Eric Franzosa, Fana Gebreab, Bryan J. Gutierrez, Madeleine F. Hardy, Mike Jin, Shuli Kang, Ruth Kiros, Guan Ning Lin, Katja Luck, Andrew MacWilliams, Jörg Menche, Ryan R. Murray, Alexandre Palagi, Matthew M. Poulin, Xavier Rambout, John Rasla, Patrick Reichert, Viviana Romero, Elien Ruyssinck, Julie M. Sahalie, Annemarie Scholz, Akash A. Shah, Amitabh Sharma, Yun Shen, Kerstin Spirohn, Stanley Tam, Alexander O. Tejeda, Shelly A. Wanamaker, Jean-Claude Twizere, Kerwin Vega, Jennifer Walsh, Michael E. Cusick, Yu Xia, Albert-László Barabási, Lilia M. Iakoucheva, Patrick Aloy, Javier De Las Rivas, Jan Tavernier, Michael A. Calderwood, David E. Hill, Tong Hao, Frederick P. Roth, Marc Vidal

Cell. Author manuscript; available in PMC 2015 Nov 20.

Published in final edited form as: Cell. 2014 Nov 20; 159(5): 1212–1226. doi: 10.1016/j.cell.2014.10.050

PMCID:: PMC4266588

Abstract Article PDF–3.1M

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