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Select item 112210861.

SETDB1 regulates short interspersed nuclear elements and chromatin loop organization in mouse neural precursor cells

Daijing Sun, Yueyan Zhu, Wenzhu Peng, Shenghui Zheng, Jie Weng, Shulong Dong, Jiaqi Li, Qi Chen, Chuanhui Ge, Liyong Liao, Yuhao Dong, Yun Liu, Weida Meng, Yan Jiang

Genome Biol. 2024; 25: 175. Published online 2024 Jul 3. doi: 10.1186/s13059-024-03327-2

PMCID:: PMC11221086

Abstract Article PDF–3.5M

Select item 109176602.

Genetic determinants of micronucleus formation in vivo

D. J. Adams, B. Barlas, R. E. McIntyre, I. Salguero, L. van der Weyden, A. Barros, J. R. Vicente, N. Karimpour, A. Haider, M. Ranzani, G. Turner, N. A. Thompson, V. Harle, R. Olvera-León, C. D. Robles-Espinoza, A. O. Speak, N. Geisler, W. J. Weninger, S. H. Geyer, J. Hewinson, N. A. Karp, The Sanger Mouse Genetics Project, B. Fu, F. Yang, Z. Kozik, J. Choudhary, L. Yu, M. S. van Ruiten, B. D. Rowland, C. J. Lelliott, M. del Castillo Velasco-Herrera, R. Verstraten, L. Bruckner, A. G. Henssen, M. A. Rooimans, J. de Lange, T. J. Mohun, M. J. Arends, K. A. Kentistou, P. A. Coelho, Y. Zhao, H. Zecchini, J. R. B. Perry, S. P. Jackson, G. Balmus

Nature. 2024; 627(8002): 130–136. Published online 2024 Feb 14. doi: 10.1038/s41586-023-07009-0

PMCID:: PMC10917660

Abstract Article PDF–4.8M

Select item 107620143.

Cell-type differential targeting of SETDB1 prevents aberrant CTCF binding, chromatin looping, and cis-regulatory interactions

Phoebe Lut Fei Tam, Ming Fung Cheung, Lu Yan Chan, Danny Leung

Nat Commun. 2024; 15: 15. Published online 2024 Jan 2. doi: 10.1038/s41467-023-44578-0

PMCID:: PMC10762014

Abstract Article PDF–2.9M

Select item 98014944.

Histone H3K9 Methyltransferase SETDB1 Augments Invadopodia Formation to Promote Tumor Metastasis

Shuhei Ueshima, Jia Fang

Oncogene. Author manuscript; available in PMC 2022 Dec 30.

Published in final edited form as: Oncogene. 2022 Jun; 41(24): 3370–3380. Published online 2022 May 11. doi: 10.1038/s41388-022-02345-3

PMCID:: PMC9801494

Abstract Article PDF–5.5M

Select item 97055625.

Active DNA damage response signaling initiates and maintains meiotic sex chromosome inactivation

Hironori Abe, Yu-Han Yeh, Yasuhisa Munakata, Kei-Ichiro Ishiguro, Paul R. Andreassen, Satoshi H. Namekawa

Nat Commun. 2022; 13: 7212. Published online 2022 Nov 28. doi: 10.1038/s41467-022-34295-5

PMCID:: PMC9705562

Abstract Article PDF–8.5M

Select item 94851276.

Dominant role of DNA methylation over H3K9me3 for IAP silencing in endoderm

Zeyang Wang, Rui Fan, Angela Russo, Filippo M. Cernilogar, Alexander Nuber, Silvia Schirge, Irina Shcherbakova, Iva Dzhilyanova, Enes Ugur, Tobias Anton, Lisa Richter, Heinrich Leonhardt, Heiko Lickert, Gunnar Schotta

Nat Commun. 2022; 13: 5447. Published online 2022 Sep 19. doi: 10.1038/s41467-022-32978-7

PMCID:: PMC9485127

Abstract Article PDF–5.6M

Select item 93032807.

SETDB1 acts as a topological accessory to Cohesin via an H3K9me3-independent, genomic shunt for regulating cell fates

Tushar Warrier, Chadi El Farran, Yingying Zeng, Benedict Shao Quan Ho, Qiuye Bao, Zi Hao Zheng, Xuezhi Bi, Huck Hui Ng, Derrick Sek Tong Ong, Justin Jang Hann Chu, Amartya Sanyal, Melissa Jane Fullwood, James J Collins, Hu Li, Jian Xu, Yuin-Han Loh

Nucleic Acids Res. 2022 Jul 22; 50(13): 7326–7349. Published online 2022 Jul 1. doi: 10.1093/nar/gkac531

PMCID:: PMC9303280

Abstract Article PDF–5.7M

Select item 89311168.

The Oligodendrocyte Transcription Factor 2 OLIG2 regulates transcriptional repression during myelinogenesis in rodents

Kunkun Zhang, Shaoxuan Chen, Qihua Yang, Shuanghui Guo, Qiang Chen, Zhixiong Liu, Li Li, Mengyun Jiang, Hongda Li, Jin Hu, Xu Pan, Wenbo Deng, Naian Xiao, Bo Wang, Zhan-xiang Wang, Liang Zhang, Wei Mo

Nat Commun. 2022; 13: 1423. Published online 2022 Mar 17. doi: 10.1038/s41467-022-29068-z

Correction in:: Nat Commun. 2022; 13: 3164.

PMCID:: PMC8931116

Abstract Article PDF–5.3M

Select item 88603809.

SETDB1/NSD-dependent H3K9me3/H3K36me3 dual heterochromatin maintains gene expression profiles by bookmarking poised enhancers

Amandine Barral, Gabrielle Pozo, Lucas Ducrot, Giorgio L. Papadopoulos, Sandrine Sauzet, Andrew J. Oldfield, Giacomo Cavalli, Jérôme Déjardin

Mol Cell. 2022 Feb 17; 82(4): 816–832.e12. doi: 10.1016/j.molcel.2021.12.037

PMCID:: PMC8860380

Abstract Article

Select item 876331710.

Proximity-dependent biotin identification (BioID) reveals a dynamic LSD1–CoREST interactome during embryonic stem cell differentiation

Claire E. Barnes, David M. English, Megan Broderick, Mark O. Collins, Shaun M. Cowley

Mol Omics. 2022 Jan 17; 18(1): 31–44. Published online 2021 Oct 14. doi: 10.1039/d1mo00236h

PMCID:: PMC8763317

Abstract Article

Select item 863973511.

Repression of germline genes by PRC1.6 and SETDB1 in the early embryo precedes DNA methylation-mediated silencing

Kentaro Mochizuki, Jafar Sharif, Kenjiro Shirane, Kousuke Uranishi, Aaron B. Bogutz, Sanne M. Janssen, Ayumu Suzuki, Akihiko Okuda, Haruhiko Koseki, Matthew C. Lorincz

Nat Commun. 2021; 12: 7020. Published online 2021 Dec 2. doi: 10.1038/s41467-021-27345-x

PMCID:: PMC8639735

Abstract Article PDF–3.5M

Select item 855546412.

KDM5B Promotes Immune Evasion by Recruiting SETDB1 to Silence Retroelements

Shang-Min Zhang, Wesley L. Cai, Xiaoni Liu, Durga Thakral, Jiesi Luo, Lok Hei Chan, Meaghan K. McGeary, Eric Song, Kim RM Blenman, Goran Micevic, Shlomit Jessel, Yangyi Zhang, Mingzhu Yin, Carmen J. Booth, Lucia B. Jilaveanu, William Damsky, Mario Sznol, Harriet M. Kluger, Akiko Iwasaki, Marcus W. Bosenberg, Qin Yan

Nature. Author manuscript; available in PMC 2022 Apr 20.

Published in final edited form as: Nature. 2021 Oct; 598(7882): 682–687. Published online 2021 Oct 20. doi: 10.1038/s41586-021-03994-2

PMCID:: PMC8555464

Abstract Article PDF–5.8M

Select item 851377013.

The Essential Function of SETDB1 in Homologous Chromosome Pairing and Synapsis during Meiosis

Ee-Chun Cheng, Chia-Ling Hsieh, Na Liu, Jianquan Wang, Mei Zhong, Taiping Chen, En Li, Haifan Lin

Cell Rep. Author manuscript; available in PMC 2021 Oct 13.

Published in final edited form as: Cell Rep. 2021 Jan 5; 34(1): 108575. doi: 10.1016/j.celrep.2020.108575

PMCID:: PMC8513770

Abstract Article PDF–2.4M

Select item 813216314.

Temporarily Epigenetic Repression in Bergmann Glia Regulates the Migration of Granule Cells

Shaoxuan Chen, Kunkun Zhang, Boxin Zhang, Mengyun Jiang, Xue Zhang, Yi Guo, Yingying Yu, Tianyu Qin, Hongda Li, Qiang Chen, Zhiyu Cai, Site Luo, Yi Huang, Jin Hu, Wei Mo

Adv Sci (Weinh) 2021 May; 8(10): 2003164. Published online 2021 Mar 22. doi: 10.1002/advs.202003164

PMCID:: PMC8132163

Abstract Article PDF–7.7M

Select item 793877015.

BraInMap elucidates the macromolecular connectivity landscape of mammalian brain

Reza Pourhaghighi, Peter E. A. Ash, Sadhna Phanse, Florian Goebels, Lucas Z. M. Hu, Siwei Chen, Yingying Zhang, Shayne D. Wierbowski, Samantha Boudeau, Mohamed T. Moutaoufik, Ramy H. Malty, Edyta Malolepsza, Kalliopi Tsafou, Aparna Nathan, Graham Cromar, Hongbo Guo, Ali Al Abdullatif, Daniel J. Apicco, Lindsay A. Becker, Aaron D. Gitler, Stefan M. Pulst, Ahmed Youssef, Ryan Hekman, Pierre C. Havugimana, Carl A. White, Benjamin C. Blum, Antonia Ratti, Camron D. Bryant, John Parkinson, Kasper Lage, Mohan Babu, Haiyuan Yu, Gary D. Bader, Benjamin Wolozin, Andrew Emili

Cell Syst. Author manuscript; available in PMC 2021 Apr 22.

Published in final edited form as: Cell Syst. 2020 Apr 22; 10(4): 333–350.e14. doi: 10.1016/j.cels.2020.03.003

Correction in:: Cell Syst. 2020 Aug 26; 11(2): 208.

PMCID:: PMC7938770

Abstract Article PDF–2.0M

Select item 787342316.

SETDB1 is required for intestinal epithelial differentiation and the prevention of intestinal inflammation

Lea Južnić, Kenneth Peuker, Anne Strigli, Mario Brosch, Alexander Herrmann, Robert Häsler, Michael Koch, Liz Matthiesen, Yvonne Zeissig, Britt-Sabina Löscher, Alexander Nuber, Gunnar Schotta, Volker Neumeister, Triantafyllos Chavakis, Thomas Kurth, Mathias Lesche, Andreas Dahl, Anne von Mässenhausen, Andreas Linkermann, Stefan Schreiber, Konrad Aden, Philip C Rosenstiel, Andre Franke, Jochen Hampe, Sebastian Zeissig

Gut. 2021 Mar; 70(3): 485–498. Published online 2020 Jun 5. doi: 10.1136/gutjnl-2020-321339

PMCID:: PMC7873423

Abstract Article PDF–5.1M

Select item 755651717.

SETDB1 mediated histone H3 lysine 9 methylation suppresses MLL-fusion target expression and leukemic transformation

James Ropa, Nirmalya Saha, Hsiangyu Hu, Luke F. Peterson, Moshe Talpaz, Andrew G. Muntean

Haematologica. 2020 Sep 1; 105(9): 2273–2285. Published online 2019 Sep 26. doi: 10.3324/haematol.2019.223883

PMCID:: PMC7556517

Abstract Article PDF–2.8M

Select item 699695618.

Hdac3, Setdb1, and Kap1 mark H3K9me3/H3K14ac bivalent regions in young and aged liver

Andrew J. Price, Mohan C. Manjegowda, Jessica Kain, Swetha Anandh, Irina M. Bochkis

Aging Cell. 2020 Feb; 19(2): e13092. Published online 2019 Dec 19. doi: 10.1111/acel.13092

PMCID:: PMC6996956

Abstract Article PDF–1.9M

Select item 682693619.

The H3K9 Methylation Writer SETDB1 and Its Reader MPP8 Cooperate to Silence Satellite DNA Repeats in Mouse Embryonic Stem Cells

Paola Cruz-Tapias, Philippe Robin, Julien Pontis, Laurence Del Maestro, Slimane Ait-Si-Ali

Genes (Basel) 2019 Oct; 10(10): 750. Published online 2019 Sep 25. doi: 10.3390/genes10100750

PMCID:: PMC6826936

Abstract Article PDF–2.2M

Select item 666481820.

H3K9me3-heterochromatin loss at protein-coding genes enables developmental lineage specification

Dario Nicetto, Greg Donahue, Tanya Jain, Tao Peng, Simone Sidoli, Lihong Sheng, Thomas Montavon, Justin S. Becker, Jessica M. Grindheim, Kimberly Blahnik, Benjamin A. Garcia, Kai Tan, Roberto Bonasio, Thomas Jenuwein, Kenneth S. Zaret

Science. Author manuscript; available in PMC 2019 Jul 30.

Published in final edited form as: Science. 2019 Jan 18; 363(6424): 294–297. Published online 2019 Jan 3. doi: 10.1126/science.aau0583

PMCID:: PMC6664818

Abstract Article PDF–774K

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