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Items: 1 to 20 of 283

1.
Role of Hsp70 ATPase Domain Intrinsic Dynamics and Sequence Evolution in Enabling its Functional Interactions with NEFs
Ying Liu, Lila M. Gierasch, Ivet Bahar
PLoS Comput Biol. 2010 Sep; 6(9): e1000931. Published online 2010 Sep 16. doi: 10.1371/journal.pcbi.1000931
PMCID:
PMC2940730
AbstractArticlePDF–3.0M
2.
Mutational Analysis of the Herpes Simplex Virus Type 1 UL25 DNA Packaging Protein Reveals Regions That Are Important after the Viral DNA Has Been Packaged
Maureen O'Hara, Frazer J. Rixon, Nigel D. Stow, Jill Murray, Mary Murphy, Valerie G. Preston
J Virol. 2010 May; 84(9): 4252–4263. Published online 2010 Feb 24. doi: 10.1128/JVI.02442-09
PMCID:
PMC2863786
AbstractArticlePDF–6.1M
3.
AN ANGIOTENSIN II TYPE 1 RECEPTOR ACTIVATION SWITCH PATCH REVEALED THROUGH EVOLUTIONARY TRACE ANALYSIS
Marie Mi Bonde, Rong Yao, Jian-Nong Ma, Srinivasan Madabushi, Stig Haunsø, Ethan S. Burstein, Jennifer L. Whistler, Søren P. Sheikh, Olivier Lichtarge, Jakob Lerche Hansen
Biochem Pharmacol. Author manuscript; available in PMC 2011 Jul 1.
Published in final edited form as: Biochem Pharmacol. 2010 Jul 1; 80(1): 86–94. Published online 2010 Mar 21. doi: 10.1016/j.bcp.2010.03.006
PMCID:
PMC2864232
AbstractArticlePDF–1.3M
4.
Evolution-guided discovery and recoding of allosteric pathway specificity determinants in psychoactive bioamine receptors
Gustavo J. Rodriguez, Rong Yao, Olivier Lichtarge, Theodore G. Wensel
Proc Natl Acad Sci U S A. 2010 Apr 27; 107(17): 7787–7792. Published online 2010 Apr 12. doi: 10.1073/pnas.0914877107
Correction in:
Proc Natl Acad Sci U S A. 2010 May 18; 107(20): 9476.
PMCID:
PMC2867884
AbstractArticlePDF–831K
5.
Novel Mechanism of Glycopeptide Resistance in the A40926 Producer Nonomuraea sp. ATCC 39727
Giorgia Letizia Marcone, Fabrizio Beltrametti, Elisa Binda, Lucia Carrano, Lucy Foulston, Andrew Hesketh, Mervyn Bibb, Flavia Marinelli
Antimicrob Agents Chemother. 2010 Jun; 54(6): 2465–2472. Published online 2010 Mar 22. doi: 10.1128/AAC.00106-10
PMCID:
PMC2876364
AbstractArticlePDF–1.2M
6.
Cα-trace model of the transmembrane domain of human copper transporter 1, motion and functional implications
Maya Schushan, Yariv Barkan, Turkan Haliloglu, Nir Ben-Tal
Proc Natl Acad Sci U S A. 2010 Jun 15; 107(24): 10908–10913. Published online 2010 Jun 1. doi: 10.1073/pnas.0914717107
PMCID:
PMC2890728
AbstractArticlePDF–1.8M
7.
Interactions at the 2 and 5 positions of 5-phosphoribosyl pyrophosphate are essential in Salmonella typhimurium quinolinate phosphoribosyltransferase
Zainab Bello, Barbara Stitt, Charles Grubmeyer
Biochemistry. Author manuscript; available in PMC 2011 Feb 23.
Published in final edited form as: Biochemistry. 2010 Feb 23; 49(7): 1377–1387. doi: 10.1021/bi9018219
PMCID:
PMC2891058
AbstractArticlePDF–1.8M
8.
Functional states of homooligomers: insights from the evolution of glycosyltransferases
Kosuke Hashimoto, Thomas Madej, Stephen H. Bryant, Anna R. Panchenko
J Mol Biol. Author manuscript; available in PMC 2011 May 28.
Published in final edited form as: J Mol Biol. 2010 May 28; 399(1): 196–206. Published online 2010 Apr 8. doi: 10.1016/j.jmb.2010.03.059
PMCID:
PMC2896236
AbstractArticlePDF–1.8M
9.
A semisynthetic epitope for kinase substrates
Jasmina J Allen, Manqing Li, Craig S Brinkworth, Jennifer L Paulson, Dan Wang, Anette Hübner, Wen-Hai Chou, Roger J Davis, Alma L Burlingame, Robert O Messing, Carol D Katayama, Stephen M Hedrick, Kevan M Shokat
Nat Methods. Author manuscript; available in PMC 2010 Sep 2.
Published in final edited form as: Nat Methods. 2007 Jun; 4(6): 511–516. Published online 2007 May 7. doi: 10.1038/nmeth1048
PMCID:
PMC2932705
AbstractArticlePDF–435K
10.
Reaction Mechanism and Molecular Basis for Selenium/Sulfur Discrimination of Selenocysteine Lyase
Rie Omi, Suguru Kurokawa, Hisaaki Mihara, Hideyuki Hayashi, Masaru Goto, Ikuko Miyahara, Tatsuo Kurihara, Ken Hirotsu, Nobuyoshi Esaki
J Biol Chem. 2010 Apr 16; 285(16): 12133–12139. Published online 2010 Feb 17. doi: 10.1074/jbc.M109.084475
PMCID:
PMC2852952
AbstractArticlePDF–2.0M
11.
Holocarboxylase synthetase is a chromatin protein and interacts directly with histone H3 to mediate biotinylation of K9 and K18
Baolong Bao, Valerie Pestinger, Yousef I. Hassan, Gloria E. O. Borgstahl, Carol Kolar, Janos Zempleni
J Nutr Biochem. Author manuscript; available in PMC 2012 May 1.
Published in final edited form as: J Nutr Biochem. 2011 May; 22(5): 470–475. Published online 2010 Aug 5. doi: 10.1016/j.jnutbio.2010.04.001
PMCID:
PMC2975038
AbstractArticlePDF–1.2M
12.
Evolutionary origin of a secondary structure: π-helices as cryptic but widespread insertional variations of α-helices enhancing protein functionality
Richard B. Cooley, Daniel J. Arp, P. Andrew Karplus
J Mol Biol. Author manuscript; available in PMC 2011 Nov 26.
Published in final edited form as: J Mol Biol. 2010 Nov 26; 404(2): 232–246. Published online 2010 Oct 1. doi: 10.1016/j.jmb.2010.09.034
PMCID:
PMC2981643
AbstractArticlePDF–2.4M
13.
Mosquito Vitellogenin Genes: Comparative Sequence Analysis, Gene Duplication, and the Role of Rare Synonymous Codon Usage in Regulating Expression
Jun Isoe, Henry H. Hagedorn
J Insect Sci. 2007; 7: 1. Published online 2007 Jan 12. doi: 10.1673/031.007.0101
PMCID:
PMC2999396
AbstractArticlePDF–4.2M
14.
Accurate Protein Structure Annotation through Competitive Diffusion of Enzymatic Functions over a Network of Local Evolutionary Similarities
Eric Venner, Andreas Martin Lisewski, Serkan Erdin, R. Matthew Ward, Shivas R. Amin, Olivier Lichtarge
PLoS One. 2010; 5(12): e14286. Published online 2010 Dec 13. doi: 10.1371/journal.pone.0014286
PMCID:
PMC3001439
AbstractArticlePDF–696K
15.
Tryptophan hydroxylase 2 aggregates through disulfide cross-linking upon oxidation: Possible link to serotonin deficits and non-motor symptoms in Parkinson's disease
Donald M. Kuhn, Catherine E. Sykes, Timothy J. Geddes, Karen L. Eskow Jaunarajs, Christopher Bishop
J Neurochem. Author manuscript; available in PMC 2012 Feb 1.
Published in final edited form as: J Neurochem. 2011 Feb; 116(3): 426–437. Published online 2010 Dec 13. doi: 10.1111/j.1471-4159.2010.07123.x
PMCID:
PMC3019244
AbstractArticlePDF–301K
16.
Dynamic conformations of the CD38-mediated NAD cyclization captured in a single crystal
HongMin Zhang, Richard Graeff, Zhe Chen, LiangRen Zhang, LiHe Zhang, HonCheung Lee, Quan Hao
J Mol Biol. Author manuscript; available in PMC 2012 Jan 28.
Published in final edited form as: J Mol Biol. 2011 Jan 28; 405(4): 1070–1078. Published online 2010 Dec 8. doi: 10.1016/j.jmb.2010.11.044
PMCID:
PMC3019291
AbstractArticlePDF–1.8M
17.
C-Terminal Domain Residues Important for Secretion and Attachment of RgpB in Porphyromonas gingivalis
Nada Slakeski, Christine A. Seers, Kaiting Ng, Caroline Moore, Steven M. Cleal, Paul D. Veith, Alvin W. Lo, Eric C. Reynolds
J Bacteriol. 2011 Jan; 193(1): 132–142. Published online 2010 Oct 22. doi: 10.1128/JB.00773-10
PMCID:
PMC3019955
AbstractArticlePDF–1.3M
18.
Structures of segments of α-synuclein fused to maltose-binding protein suggest intermediate states during amyloid formation
Minglei Zhao, Duilio Cascio, Michael R Sawaya, David Eisenberg
Protein Sci. 2011 Jun; 20(6): 996–1004. Published online 2011 Apr 1. doi: 10.1002/pro.630
PMCID:
PMC3104229
AbstractArticlePDF–532K
19.
Site-Directed Spin-Labeling Study of the Light-Harvesting Complex CP29
Aleh A. Kavalenka, Ruud B. Spruijt, Cor J.A.M. Wolfs, Janez Štrancar, Roberta Croce, Marcus A. Hemminga, Herbert van Amerongen
Biophys J. 2009 May 6; 96(9): 3620–3628. doi: 10.1016/j.bpj.2009.01.038
PMCID:
PMC2711397
AbstractArticlePDF–841K
20.
Recognition of Interaction Interface Residues in Low-Resolution Structures of Protein Assemblies Solely from the Positions of Cα Atoms
Rupali A. Gadkari, Deepthi Varughese, N. Srinivasan
PLoS One. 2009; 4(2): e4476. Published online 2009 Feb 13. doi: 10.1371/journal.pone.0004476
PMCID:
PMC2641018
AbstractArticlePDF–906K

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