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Select item 2625681.

Identification of Sequential Viral Escape Mutants Associated with Altered T-Cell Responses in a Human Immunodeficiency Virus Type 1-Infected Individual

Mark J. Geels, Marion Cornelissen, Hanneke Schuitemaker, Kiersten Anderson, David Kwa, Jolanda Maas, John T. Dekker, Elly Baan, Fokla Zorgdrager, Remco van den Burg, Martijn van Beelen, Vladimir V. Lukashov, Tong-Ming Fu, William A. Paxton, Lia van der Hoek, Sheri A. Dubey, John W. Shiver, Jaap Goudsmit

J Virol. 2003 Dec; 77(23): 12430–12440. doi: 10.1128/JVI.77.23.12430-12440.2003

PMCID:: PMC262568

Abstract Article PDF–704K

Select item 69241692.

A CRISPR/Cas9 library to map the HIV-1 provirus genetic fitness

K. E. YODER

Acta Virol. Author manuscript; available in PMC 2020 Jan 1.

Published in final edited form as: Acta Virol. 2019; 63(2): 129–138. doi: 10.4149/av_2019_201

PMCID:: PMC6924169

Abstract Article PDF–624K

Select item 64437503.

Earlier Initiation of Antiretroviral Treatment Coincides With an Initial Control of the HIV-1 Sub-Subtype F1 Outbreak Among Men-Having-Sex-With-Men in Flanders, Belgium

Lore Vinken, Katrien Fransen, Lize Cuypers, Ivailo Alexiev, Claudia Balotta, Laurent Debaisieux, Carole Seguin-Devaux, Sergio García Ribas, Perpétua Gomes, Francesca Incardona, Rolf Kaiser, Jean Ruelle, Murat Sayan, Simona Paraschiv, Roger Paredes, Martine Peeters, Anders Sönnerborg, Ellen Vancutsem, Anne-Mieke Vandamme, Sigi Van den Wijngaert, Marc Van Ranst, Chris Verhofstede, Tanja Stadler, Philippe Lemey, Kristel Van Laethem

Front Microbiol. 2019; 10: 613. Published online 2019 Mar 26. doi: 10.3389/fmicb.2019.00613

PMCID:: PMC6443750

Abstract Article PDF–4.9M

Select item 63690054.

No detection of CD4-independent human immunodeficiency virus 1 envelope glycoproteins in brain tissue of patients with or without neurological complications

Briana Quitadamo, Paul J. Peters, Matthew Koch, Katherine Luzuriaga, Cecilia Cheng-Mayer, Paul R. Clapham, Maria Paz Gonzalez-Perez

Arch Virol. 2019; 164(2): 473–482. Published online 2018 Nov 10. doi: 10.1007/s00705-018-4094-1

PMCID:: PMC6369005

Abstract Article PDF–1.0M

Select item 56255015.

Identification of Emerging Macrophage-Tropic HIV-1 R5 Variants in Brain Tissue of AIDS Patients without Severe Neurological Complications

Maria Paz Gonzalez-Perez, Paul J. Peters, Olivia O'Connell, Nilsa Silva, Carole Harbison, Sheila Cummings Macri, Saravanan Kaliyaperumal, Katherine Luzuriaga, Paul R. Clapham

J Virol. 2017 Oct 15; 91(20): e00755-17. Prepublished online 2017 Aug 2. Published online 2017 Sep 27. doi: 10.1128/JVI.00755-17

PMCID:: PMC5625501

Abstract Article PDF–3.0M

Select item 52679676.

Effect of HIV-1 Subtype C integrase mutations implied using molecular modeling and docking data

Jaiprasath Sachithanandham, Karnati Konda Reddy, King Solomon, Shoba David, Sanjeev Kumar Singh, Veena Vadhini Ramalingam, Susanne Alexander Pulimood, Ooriyapadickal Cherian Abraham, Pricilla Rupali, Gopalan Sridharan, Rajesh Kannangai

Bioinformation. 2016; 12(3): 221–230. Published online 2016 Jun 15. doi: 10.6026/97320630012221

PMCID:: PMC5267967

Abstract Article PDF–8.5M

Select item 48904717.

Short-term treatment outcomes in human immunodeficiency virus type-1 and hepatitis B virus co-infections

Kwamena William Coleman Sagoe, Kwabena Obeng Duedu, Francesca Ziga, Afrakoma Adjoa Agyei, Theophilus Korku Adiku, Margaret Lartey, Julius Abraham Addo Mingle, Max Arens

Ann Clin Microbiol Antimicrob. 2016; 15: 38. Published online 2016 Jun 2. doi: 10.1186/s12941-016-0152-2

PMCID:: PMC4890471

Abstract Article PDF–809K

Select item 46874738.

The external domains of the HIV-1 envelope are a mutational cold spot

Ron Geller, Pilar Domingo-Calap, José M. Cuevas, Paola Rossolillo, Matteo Negroni, Rafael Sanjuán

Nat Commun. 2015; 6: 8571. Published online 2015 Oct 9. doi: 10.1038/ncomms9571

PMCID:: PMC4687473

Abstract Article PDF–882K

Select item 45741559.

Extremely High Mutation Rate of HIV-1 In Vivo

José M. Cuevas, Ron Geller, Raquel Garijo, José López-Aldeguer, Rafael Sanjuán

PLoS Biol. 2015 Sep; 13(9): e1002251. Published online 2015 Sep 16. doi: 10.1371/journal.pbio.1002251

PMCID:: PMC4574155

Abstract Article PDF–1.1M

Select item 456336010.

Comparison of digital PCR platforms and semi-nested qPCR as a tool to determine the size of the HIV reservoir

K. J. Bosman, M. Nijhuis, P. M. van Ham, A. M. J. Wensing, K. Vervisch, L. Vandekerckhove, W. De Spiegelaere

Sci Rep. 2015; 5: 13811. Published online 2015 Sep 9. doi: 10.1038/srep13811

PMCID:: PMC4563360

Abstract Article PDF–1.0M

Select item 440303611.

Molecular characterization of full-length Tat in HIV-1 subtypes B and C

Chandra Nath Roy, Irona Khandaker, Yuki Furuse, Hitoshi Oshitani

Bioinformation. 2015; 11(3): 151–160. Published online 2015 Mar 31. doi: 10.6026/97320630011151

PMCID:: PMC4403036

Abstract Article PDF–418K

Select item 393894712.

Short Communication: Molecular Epidemiology of HIV Type 1 Infection in Northern Greece (2009–2010): Evidence of a Transmission Cluster of HIV Type 1 Subtype A1 Drug-Resistant Strains Among Men Who Have Sex with Men

Zoi-Anna Antoniadou, Ioanna Kousiappa, Lemonia Skoura, Dimitris Pilalas, Simeon Metallidis, Pavlos Nicolaidis, Nicolaos Malisiovas, Leondios G. Kostrikis

AIDS Res Hum Retroviruses. 2014 Mar 1; 30(3): 225–232. doi: 10.1089/aid.2013.0166

PMCID:: PMC3938947

Abstract Article PDF–198K

Select item 386515613.

Highly-Sensitive Allele-Specific PCR Testing Identifies a Greater Prevalence of Transmitted HIV Drug Resistance in Japan

Masako Nishizawa, Junko Hattori, Teiichiro Shiino, Tetsuro Matano, Walid Heneine, Jeffrey A. Johnson, Wataru Sugiura

PLoS One. 2013; 8(12): e83150. Published online 2013 Dec 16. doi: 10.1371/journal.pone.0083150

PMCID:: PMC3865156

Abstract Article PDF–582K

Select item 350297714.

Universal Amplification, Next-Generation Sequencing, and Assembly of HIV-1 Genomes

Astrid Gall, Bridget Ferns, Clare Morris, Simon Watson, Matthew Cotten, Mark Robinson, Neil Berry, Deenan Pillay, Paul Kellam

J Clin Microbiol. 2012 Dec; 50(12): 3838–3844. doi: 10.1128/JCM.01516-12

PMCID:: PMC3502977

Abstract Article PDF–1.8M

Select item 347199615.

Characterization of full-length HIV-1 CRF17_BF genomes and comparison to the prototype CRF12_BF strains

Paula C. Aulicino, Manuel Gómez-Carrillo, Gonzalo Bello, Carlos Rocco, Andrea Mangano, Jean Carr, Luisa Sen, Brian Foley

Infect Genet Evol. Author manuscript; available in PMC 2012 Oct 15.

Published in final edited form as: Infect Genet Evol. 2012 Mar; 12(2): 443–447. Published online 2012 Jan 12. doi: 10.1016/j.meegid.2012.01.003

PMCID:: PMC3471996

Abstract Article PDF–701K

Select item 330892516.

HIV-1 Subtype distribution in morocco based on national sentinel surveillance data 2004-2005

Mohammed Akrim, Sanae Lemrabet, Elmir Elharti, Rebecca R Gray, Jean Claude Tardy, Robert L Cook, Marco Salemi, Patrice Andre, Taj Azarian, Rajae El Aouad

AIDS Res Ther. 2012; 9: 5. Published online 2012 Feb 14. doi: 10.1186/1742-6405-9-5

PMCID:: PMC3308925

Abstract Article PDF–917K

Select item 327592417.

HIV Type 1 in a Rural Coastal Town in Kenya Shows Multiple Introductions with Many Subtypes and Much Recombination

Stéphane Hué, Amin S. Hassan, Helen Nabwera, Eduard J. Sanders, Deenan Pillay, James A. Berkley, Patricia A. Cane

AIDS Res Hum Retroviruses. 2012 Feb; 28(2): 220–224. doi: 10.1089/aid.2011.0048

PMCID:: PMC3275924

Abstract Article PDF–535K

Select item 298138018.

Identification and Characterization of CRF02_AG, CRF06_cpx, and CRF09_cpx Recombinant Subtypes in Mali, West Africa

Hiromi Imamichi, Ousmane Koita, Djeneba Dabitao, Sounkalo Dao, Mahamadou Ibrah, Dramane Sogoba, Robin L. Dewar, Steve C. Berg, Min-Kang Jiang, Mark Parta, Janice A. Washington, Michael A. Polis, H. Clifford Lane, Anatole Tounkara

AIDS Res Hum Retroviruses. 2009 Jan; 25(1): 45–55. doi: 10.1089/aid.2008.0111

PMCID:: PMC2981380

Abstract Article PDF–304K

Select item 291137019.

Diversity of HIV-1 Subtype B: Implications to the Origin of BF Recombinants

Élcio Leal, Fabiola E. Villanova

PLoS One. 2010; 5(7): e11833. Published online 2010 Jul 28. doi: 10.1371/journal.pone.0011833

PMCID:: PMC2911370

Abstract Article PDF–1.1M

Select item 271629920.

Discovery of novel targets for multi-epitope vaccines: Screening of HIV-1 genomes using association rule mining

Sinu Paul, Helen Piontkivska

Retrovirology. 2009; 6: 62. Published online 2009 Jul 6. doi: 10.1186/1742-4690-6-62

PMCID:: PMC2716299

Abstract Article PDF–996K

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