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Select item 36316881.

Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways

Matthew J. Rardin, John C. Newman, Jason M. Held, Michael P. Cusack, Dylan J. Sorensen, Biao Li, Birgit Schilling, Sean D. Mooney, C. Ronald Kahn, Eric Verdin, Bradford W. Gibson

Proc Natl Acad Sci U S A. 2013 Apr 16; 110(16): 6601–6606. Published online 2013 Apr 1. doi: 10.1073/pnas.1302961110

PMCID:: PMC3631688

Abstract Article PDF–851K

Select item 30359692.

A Tissue-Specific Atlas of Mouse Protein Phosphorylation and Expression

Edward L. Huttlin, Mark P. Jedrychowski, Joshua E. Elias, Tapasree Goswami, Ramin Rad, Sean A. Beausoleil, Judit Villén, Wilhelm Haas, Mathew E. Sowa, Steven P. Gygi

Cell. Author manuscript; available in PMC 2011 Dec 23.

Published in final edited form as: Cell. 2010 Dec 23; 143(7): 1174–1189. doi: 10.1016/j.cell.2010.12.001

PMCID:: PMC3035969

Abstract Article PDF–2.6M

Select item 5289283.

The Status, Quality, and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)

Genome Res. 2004 Oct; 14(10b): 2121–2127. doi: 10.1101/gr.2596504

Correction in:: Genome Res. 2006 Jun; 16(6): 804.

PMCID:: PMC528928

Abstract Article PDF–140K

Select item 61202214.

2D DIGE proteomic analysis reveals fasting‐induced protein remodeling through organ‐specific transcription factor(s) in mice

Shotaro Kamata, Junya Yamamoto, Haruka Ohtani, Yuka Tosaka, Sayumi Yoshikawa, Noriyuki Akahoshi, Isao Ishii

FEBS Open Bio. 2018 Sep; 8(9): 1524–1543. Published online 2018 Aug 13. doi: 10.1002/2211-5463.12497

PMCID:: PMC6120221

Abstract Article PDF–1.8M

Select item 59962685.

Data on protein abundance alteration induced by chronic exercise in mdx mice model of Duchenne muscular dystrophy and potential modulation by apocynin and taurine

Tania Gamberi, Tania Fiaschi, Elisa Valocchia, Alessandra Modesti, Paola Mantuano, Jean-Francois Rolland, Francesca Sanarica, Annamaria De Luca, Francesca Magherini

Data Brief. 2018 Jun; 18: 555–575. Published online 2018 Mar 19. doi: 10.1016/j.dib.2018.03.037

PMCID:: PMC5996268

Abstract Article PDF–2.4M

Select item 58203636.

Increased Degradation Rates in the Components of the Mitochondrial Oxidative Phosphorylation Chain in the Cerebellum of Old Mice

Aurel Popa-Wagner, Raluca E. Sandu, Coman Cristin, Adriana Uzoni, Kevin A. Welle, Jennifer R. Hryhorenko, Sina Ghaemmaghami

Front Aging Neurosci. 2018; 10: 32. Published online 2018 Feb 16. doi: 10.3389/fnagi.2018.00032

PMCID:: PMC5820363

Abstract Article PDF–1008K

Select item 46696937.

Impairment of enzymatic antioxidant defenses is associated with bilirubin-induced neuronal cell death in the cerebellum of Ugt1 KO mice

G Bortolussi, E Codarin, G Antoniali, C Vascotto, S Vodret, S Arena, L Cesaratto, A Scaloni, G Tell, A F Muro

Cell Death Dis. 2015 May; 6(5): e1739. Published online 2015 May 7. doi: 10.1038/cddis.2015.113

PMCID:: PMC4669693

Abstract Article PDF–4.1M

Select item 45737718.

Chronic intermittent ethanol exposure and withdrawal leads to adaptations in nucleus accumbens core postsynaptic density proteome and dendritic spines

Joachim D. Uys, Natalie S. McGuier, Justin T. Gass, William C. Griffin, III, Lauren E. Ball, Patrick J. Mulholland

Addict Biol. Author manuscript; available in PMC 2017 May 1.

Published in final edited form as: Addict Biol. 2016 May; 21(3): 560–574. Published online 2015 Mar 17. doi: 10.1111/adb.12238

PMCID:: PMC4573771

Abstract Article PDF–1.5M

Select item 42234879.

Quantitative Proteomic Analysis Reveals Metabolic Alterations, Calcium Dysregulation, and Increased Expression of Extracellular Matrix Proteins in Laminin α2 Chain–deficient Muscle

Bruno Menezes de Oliveira, Cintia Y. Matsumura, Cibely C. Fontes-Oliveira, Kinga I. Gawlik, Helena Acosta, Patrik Wernhoff, Madeleine Durbeej

Mol Cell Proteomics. 2014 Nov; 13(11): 3001–3013. Published online 2014 Jul 3. doi: 10.1074/mcp.M113.032276

PMCID:: PMC4223487

Abstract Article PDF–1.2M

Select item 418042310.

Cyclophilin D Modulates the Mitochondrial Acetylome

Tiffany Tuyen M. Nguyen, Renee Wong, Sara Menazza, Junhui Sun, Yong Chen, Guanghui Wang, Marjan Gucek, Charles Steenbergen, Michael N. Sack, Elizabeth Murphy

Circ Res. Author manuscript; available in PMC 2014 Dec 6.

Published in final edited form as: Circ Res. 2013 Dec 6; 113(12): 1308–1319. Published online 2013 Sep 23. doi: 10.1161/CIRCRESAHA.113.301867

PMCID:: PMC4180423

Abstract Article PDF–1.9M

Select item 404617911.

Does reversible cysteine oxidation link the Western diet to cardiac dysfunction?

Jessica B. Behring, Vikas Kumar, Stephen A. Whelan, Pratibha Chauhan, Deborah A. Siwik, Catherine E. Costello, Wilson S. Colucci, Richard A. Cohen, Mark E. McComb, Markus M. Bachschmid

FASEB J. 2014 May; 28(5): 1975–1987. doi: 10.1096/fj.13-233445

PMCID:: PMC4046179

Abstract Article

Select item 373458112.

Phosphoinositide-specific Phospholipase C β 1b (PI-PLCβ1b) Interactome: Affinity Purification-Mass Spectrometry Analysis of PI-PLCβ1b with Nuclear Protein

Manuela Piazzi, William L. Blalock, Alberto Bavelloni, Irene Faenza, Antonietta D'Angelo, Nadir M. Maraldi, Lucio Cocco

Mol Cell Proteomics. 2013 Aug; 12(8): 2220–2235. Published online 2013 May 9. doi: 10.1074/mcp.M113.029686

PMCID:: PMC3734581

Abstract Article PDF–1.9M

Select item 372195013.

Proteomic analysis of mitochondrial proteins in a mouse model of type 2 diabetes

MF Essop, WA Chan, S Hattingh

Cardiovasc J Afr. 2011 Aug; 22(4): 175–178. doi: 10.5830/CVJA-2010-058

PMCID:: PMC3721950

Abstract Article PDF–2.0M

Select item 332494614.

Mitochondrial Acetylome Analysis in a Mouse Model of Alcohol-Induced Liver Injury Utilizing SIRT3 Knockout Mice

Kristofer S. Fritz, James J. Galligan, Matthew D. Hirschey, Eric Verdin, Dennis R. Petersen

J Proteome Res. Author manuscript; available in PMC 2013 Mar 2.

Published in final edited form as: J Proteome Res. 2012 Mar 2; 11(3): 1633–1643. Published online 2012 Feb 21. doi: 10.1021/pr2008384

PMCID:: PMC3324946

Abstract Article PDF–3.5M

Select item 323466215.

Peroxiredoxin 3 Is a Key Molecule Regulating Adipocyte Oxidative Stress, Mitochondrial Biogenesis, and Adipokine Expression

Joo Young Huh, Yunghee Kim, Jaeho Jeong, Jehyun Park, Inok Kim, Kyu Ha Huh, Yu Seun Kim, Hyun Ae Woo, Sue Goo Rhee, Kong-Joo Lee, Hunjoo Ha

Antioxid Redox Signal. 2012 Feb 1; 16(3): 229–243. doi: 10.1089/ars.2010.3766

PMCID:: PMC3234662

Abstract Article PDF–1.3M

Select item 307503716.

Characterization of potential S-nitrosylation sites in the myocardium

Mark J. Kohr, Angel M. Aponte, Junhui Sun, Guanghui Wang, Elizabeth Murphy, Marjan Gucek, Charles Steenbergen

Am J Physiol Heart Circ Physiol. 2011 Apr; 300(4): H1327–H1335. Published online 2011 Jan 28. doi: 10.1152/ajpheart.00997.2010

PMCID:: PMC3075037

Abstract Article

Select item 286023417.

Mutant Prion Protein Expression Is Associated with an Alteration of the Rab GDP Dissociation Inhibitor α (GDI)/Rab11 Pathway

Tania Massignan, Emiliano Biasini, Eliana Lauranzano, Pietro Veglianese, Mauro Pignataro, Luana Fioriti, David A. Harris, Mario Salmona, Roberto Chiesa, Valentina Bonetto

Mol Cell Proteomics. 2010 Apr; 9(4): 611–622. Published online 2009 Dec 7. doi: 10.1074/mcp.M900271-MCP200

PMCID:: PMC2860234

Abstract Article PDF–599K

Select item 280614518.

Cardioprotection leads to novel changes in the mitochondrial proteome

Renee Wong, Angel M. Aponte, Charles Steenbergen, Elizabeth Murphy

Am J Physiol Heart Circ Physiol. 2010 Jan; 298(1): H75–H91. Published online 2009 Oct 23. doi: 10.1152/ajpheart.00515.2009

PMCID:: PMC2806145

Abstract Article

Select item 267610119.

Proteolipid Protein Is Required for Transport of Sirtuin 2 into CNS Myelin

Hauke B. Werner, Katja Kuhlmann, Siming Shen, Marina Uecker, Anke Schardt, Kalina Dimova, Foteini Orfaniotou, Ajit Dhaunchak, Bastian G. Brinkmann, Wiebke Möbius, Lenny Guarente, Patrizia Casaccia-Bonnefil, Olaf Jahn, Klaus-Armin Nave

J Neurosci. 2007 Jul 18; 27(29): 7717–7730. doi: 10.1523/JNEUROSCI.1254-07.2007

PMCID:: PMC2676101

Abstract Article PDF–613K

Select item 259730220.

Oxidative Inactivation of Key Mitochondrial Proteins Leads to Dysfunction and Injury in Hepatic Ischemia Reperfusion

KWAN-HOON MOON, BRIAN L. HOOD, PARTHA MUKHOPADHYAY, RAJESH MOHANRAJ, MOHAMED A. ABDELMEGEED, YONG-IL KWON, THOMAS P. CONRADS, TIMOTHY D. VEENSTRA, BYOUNG-JOON SONG, PAL PACHER

Gastroenterology. Author manuscript; available in PMC 2009 Oct 1.

Published in final edited form as: Gastroenterology. 2008 Oct; 135(4): 1344–1357. Published online 2008 Jun 25. doi: 10.1053/j.gastro.2008.06.048