PMC Links for Protein (Select 269849656) - PMC

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Select item 54585191.

Splicing modulators act at the branch point adenosine binding pocket defined by the PHF5A–SF3b complex

Teng Teng, Jennifer HC Tsai, Xiaoling Puyang, Michael Seiler, Shouyong Peng, Sudeep Prajapati, Daniel Aird, Silvia Buonamici, Benjamin Caleb, Betty Chan, Laura Corson, Jacob Feala, Peter Fekkes, Baudouin Gerard, Craig Karr, Manav Korpal, Xiang Liu, Jason T. Lowe, Yoshiharu Mizui, James Palacino, Eunice Park, Peter G. Smith, Vanitha Subramanian, Zhenhua Jeremy Wu, Jian Zou, Lihua Yu, Agustin Chicas, Markus Warmuth, Nicholas Larsen, Ping Zhu

Nat Commun. 2017; 8: 15522. Published online 2017 May 25. doi: 10.1038/ncomms15522

PMCID:: PMC5458519

Abstract Article PDF–1.8M

Select item 47752202.

Cross-talk between PRMT1-mediated methylation and ubiquitylation on RBM15 controls RNA splicing

Li Zhang, Ngoc-Tung Tran, Hairui Su, Rui Wang, Yuheng Lu, Haiping Tang, Sayura Aoyagi, Ailan Guo, Alireza Khodadadi-Jamayran, Dewang Zhou, Kun Qian, Todd Hricik, Jocelyn Côté, Xiaosi Han, Wenping Zhou, Suparna Laha, Omar Abdel-Wahab, Ross L Levine, Glen Raffel, Yanyan Liu, Dongquan Chen, Haitao Li, Tim Townes, Hengbin Wang, Haiteng Deng, Y George Zheng, Christina Leslie, Minkui Luo, Xinyang Zhao

eLife. 2015; 4: e07938. Published online 2015 Nov 17. doi: 10.7554/eLife.07938

PMCID:: PMC4775220

Abstract Article PDF–4.0M

Select item 44244103.

System-wide Analysis of SUMOylation Dynamics in Response to Replication Stress Reveals Novel Small Ubiquitin-like Modified Target Proteins and Acceptor Lysines Relevant for Genome Stability

Zhenyu Xiao, Jer-Gung Chang, Ivo A. Hendriks, Jón Otti Sigurðsson, Jesper V. Olsen, Alfred C.O. Vertegaal

Mol Cell Proteomics. 2015 May; 14(5): 1419–1434. doi: 10.1074/mcp.O114.044792

PMCID:: PMC4424410

Abstract Article PDF–2.2M

Select item 42590104.

Uncovering Global SUMOylation Signaling Networks in a Site-Specific Manner

Ivo A. Hendriks, Rochelle C.J. D’Souza, Bing Yang, Matty Verlaan-de Vries, Matthias Mann, Alfred C.O. Vertegaal

Nat Struct Mol Biol. Author manuscript; available in PMC 2015 Apr 1.

Published in final edited form as: Nat Struct Mol Biol. 2014 Oct; 21(10): 927–936. Published online 2014 Sep 14. doi: 10.1038/nsmb.2890

PMCID:: PMC4259010

Abstract Article PDF–2.9M

Select item 41517165.

Mapping of SUMO sites and analysis of SUMOylation changes induced by external stimuli

Francis Impens, Lilliana Radoshevich, Pascale Cossart, David Ribet

Proc Natl Acad Sci U S A. 2014 Aug 26; 111(34): 12432–12437. Published online 2014 Aug 11. doi: 10.1073/pnas.1413825111

PMCID:: PMC4151716

Abstract Article PDF–1.0M

Select item 40671676.

Cancer-relevant Splicing Factor CAPERα Engages the Essential Splicing Factor SF3b155 in a Specific Ternary Complex

Sarah Loerch, Alexandre Maucuer, Valérie Manceau, Michael R. Green, Clara L. Kielkopf

J Biol Chem. 2014 Jun 20; 289(25): 17325–17337. Published online 2014 May 2. doi: 10.1074/jbc.M114.558825

PMCID:: PMC4067167

Abstract Article PDF–3.5M

Select item 36136097.

PQBP1, a factor linked to intellectual disability, affects alternative splicing associated with neurite outgrowth

Qingqing Wang, Michael J. Moore, Guillaume Adelmant, Jarrod A. Marto, Pamela A. Silver

Genes Dev. 2013 Mar 15; 27(6): 615–626. doi: 10.1101/gad.212308.112

PMCID:: PMC3613609

Abstract Article PDF–1.5M

Select item 31459608.

Human Senataxin Resolves RNA/DNA Hybrids Formed at Transcriptional Pause Sites to Promote Xrn2-Dependent Termination

Konstantina Skourti-Stathaki, Nicholas J. Proudfoot, Natalia Gromak

Mol Cell. 2011 Jun 24; 42(6): 794–805. doi: 10.1016/j.molcel.2011.04.026

PMCID:: PMC3145960

Abstract Article

Select item 30395709.

Initial characterization of the human central proteome

Thomas R Burkard, Melanie Planyavsky, Ines Kaupe, Florian P Breitwieser, Tilmann Bürckstümmer, Keiryn L Bennett, Giulio Superti-Furga, Jacques Colinge

BMC Syst Biol. 2011; 5: 17. Published online 2011 Jan 26. doi: 10.1186/1752-0509-5-17

PMCID:: PMC3039570

Abstract Article PDF–2.3M

Select item 300405710.

Structural model of the p14/SF3b155·branch duplex complex

Matthew J. Schellenberg, Erin L. Dul, Andrew M. MacMillan

RNA. 2011 Jan; 17(1): 155–165. doi: 10.1261/rna.2224411

PMCID:: PMC3004057

Abstract Article PDF–650K

Select item 250483511.

A quantitative atlas of mitotic phosphorylation

Noah Dephoure, Chunshui Zhou, Judit Villén, Sean A. Beausoleil, Corey E. Bakalarski, Stephen J. Elledge, Steven P. Gygi

Proc Natl Acad Sci U S A. 2008 Aug 5; 105(31): 10762–10767. Published online 2008 Jul 31. doi: 10.1073/pnas.0805139105

PMCID:: PMC2504835

Abstract Article PDF–1.0M

Select item 137058512.

The human 18S U11/U12 snRNP contains a set of novel proteins not found in the U2-dependent spliceosome

CINDY L. WILL, CLAUDIA SCHNEIDER, MARKUS HOSSBACH, HENNING URLAUB, REINHARD RAUHUT, SAYDA ELBASHIR, THOMAS TUSCHL, REINHARD LÜHRMANN

RNA. 2004 Jun; 10(6): 929–941. doi: 10.1261/rna.7320604

PMCID:: PMC1370585

Abstract Article PDF–396K

Select item 137026613.

Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis.

Melissa S Jurica, Lawrence J Licklider, Steven R Gygi, Nikolaus Grigorieff, Melissa J Moore

RNA. 2002 Apr; 8(4): 426–439. doi: 10.1017/s1355838202021088

PMCID:: PMC1370266

Summary PDF–11M

Select item 136054514.

Crystal structure of a core spliceosomal protein interface

Matthew J. Schellenberg, Ross A. Edwards, Dustin B. Ritchie, Oliver A. Kent, Monika M. Golas, Holger Stark, Reinhard Lührmann, J. N. Mark Glover, Andrew M. MacMillan

Proc Natl Acad Sci U S A. 2006 Jan 31; 103(5): 1266–1271. Published online 2006 Jan 23. doi: 10.1073/pnas.0508048103

PMCID:: PMC1360545

Abstract Article PDF–577K

Select item 31683815.

Phosphorylation of spliceosomal protein SAP 155 coupled with splicing catalysis

Changyu Wang, Katrin Chua, Wolfgang Seghezzi, Emma Lees, Or Gozani, Robin Reed

Genes Dev. 1998 May 15; 12(10): 1409–1414. doi: 10.1101/gad.12.10.1409

PMCID:: PMC316838

Abstract Article PDF–479K

Select item 12627916.

Characterization of novel SF3b and 17S U2 snRNP proteins, including a human Prp5p homologue and an SF3b DEAD-box protein

Cindy L. Will, Henning Urlaub, Tilmann Achsel, Marc Gentzel, Matthias Wilm, Reinhard Lührmann

EMBO J. 2002 Sep 16; 21(18): 4978–4988. doi: 10.1093/emboj/cdf480

PMCID:: PMC126279

Abstract Article PDF–228K

Select item 688450417.

The role and robustness of the Gini coefficient as an unbiased tool for the selection of Gini genes for normalising expression profiling data

Marina Wright Muelas, Farah Mughal, Steve O’Hagan, Philip J. Day, Douglas B. Kell

Sci Rep. 2019; 9: 17960. Published online 2019 Nov 29. doi: 10.1038/s41598-019-54288-7

PMCID:: PMC6884504

Abstract Article PDF–5.9M

Select item 683081418.

CRISPR editing of sftb-1/SF3B1 in Caenorhabditis elegans allows the identification of synthetic interactions with cancer-related mutations and the chemical inhibition of splicing

Xènia Serrat, Dmytro Kukhtar, Eric Cornes, Anna Esteve-Codina, Helena Benlloch, Germano Cecere, Julián Cerón

PLoS Genet. 2019 Oct; 15(10): e1008464. Published online 2019 Oct 21. doi: 10.1371/journal.pgen.1008464

PMCID:: PMC6830814

Abstract Article PDF–2.8M

Select item 679005819.

A cellular and proteomic approach to assess proteins extracted from cryopreserved human amnion in the cultivation of corneal stromal keratocytes for stromal cell therapy

Beau J. Fenner, Nur Zahirah B. M. Yusoff, Matthias Fuest, Lei Zhou, Francisco Bandeira, Howard Y. Cajucom-Uy, H. K. Tan, Jodhbir S. Mehta, Gary H. F. Yam

Eye Vis (Lond) 2019; 6: 30. Published online 2019 Oct 12. doi: 10.1186/s40662-019-0155-0

PMCID:: PMC6790058

Abstract Article PDF–1.4M

Select item 677018720.

Affinity Purification of NF1 Protein–Protein Interactors Identifies Keratins and Neurofibromin Itself as Binding Partners

Rachel M. Carnes, Robert A. Kesterson, Bruce R. Korf, James A. Mobley, Deeann Wallis

Genes (Basel) 2019 Sep; 10(9): 650. Published online 2019 Aug 28. doi: 10.3390/genes10090650

PMCID:: PMC6770187

Abstract Article PDF–1.1M

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