PMC for SRA (Select 28926571) - PMC

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Items: 11

Select item 59460541.

High-Quality Whole-Genome Sequences for 77 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing

Pooja N. Patel, Rebecca L. Lindsey, Lisley Garcia-Toledo, Lori A. Rowe, Dhwani Batra, Samuel W. Whitley, Daniel Drapeau, Devon Stoneburg, Haley Martin, Phalasy Juieng, Vladimir N. Loparev, Nancy Strockbine

Genome Announc. 2018 May; 6(19): e00391-18. Published online 2018 May 10. doi: 10.1128/genomeA.00391-18

PMCID:: PMC5946054

Abstract Article PDF–169K

Select item 58977962.

High-Quality Whole-Genome Sequences for 59 Historical Shigella Strains Generated with PacBio Sequencing

Justin Kim, Rebecca L. Lindsey, Lisley Garcia-Toledo, Vladimir N. Loparev, Lori A. Rowe, Dhwani Batra, Phalasy Juieng, Devon Stoneburg, Haley Martin, Kristen Knipe, Peyton Smith, Nancy Strockbine

Genome Announc. 2018 Apr; 6(15): e00282-18. Published online 2018 Apr 12. doi: 10.1128/genomeA.00282-18

PMCID:: PMC5897796

Abstract Article PDF–150K

Select item 57649273.

High-Quality Whole-Genome Sequences for 21 Enterotoxigenic Escherichia coli Strains Generated with PacBio Sequencing

Peyton Smith, Rebecca L. Lindsey, Lori A. Rowe, Dhwani Batra, Devon Stripling, Lisley Garcia-Toledo, Daniel Drapeau, Kristen Knipe, Nancy Strockbine

Genome Announc. 2018 Jan; 6(2): e01311-17. Published online 2018 Jan 11. doi: 10.1128/genomeA.01311-17

PMCID:: PMC5764927

Abstract Article PDF–145K

Select item 57544854.

High-Quality Complete and Draft Genome Sequences for Three Escherichia spp. and Three Shigella spp. Generated with Pacific Biosciences and Illumina Sequencing and Optical Mapping

Max R. Schroeder, Phalasy Juieng, Dhwani Batra, Kristen Knipe, Lori A. Rowe, Mili Sheth, Peyton Smith, Lisley Garcia-Toledo, Vladimir N. Loparev, Rebecca L. Lindsey

Genome Announc. 2018 Jan; 6(1): e01384-17. Published online 2018 Jan 4. doi: 10.1128/genomeA.01384-17

PMCID:: PMC5754485

Abstract Article PDF–126K

Select item 55788555.

High-Quality Draft Genome Sequences for Four Drug-Resistant or Outbreak-Associated Shigella sonnei Strains Generated with PacBio Sequencing and Whole-Genome Maps

Rebecca L. Lindsey, Dhwani Batra, Lori Rowe, Vladimir N. Loparev, Phalasy Juieng, Lisley Garcia-Toledo, Amelia Bicknese, Devon Stripling, Haley Martin, Jessica Chen, Nancy Strockbine, Eija Trees

Genome Announc. 2017 Aug; 5(35): e00906-17. Published online 2017 Aug 31. doi: 10.1128/genomeA.00906-17

PMCID:: PMC5578855

Abstract Article PDF–119K

Select item 53560656.

High-Quality Genome Sequence of an Escherichia coli O157 Strain Carrying an mcr-1 Resistance Gene Isolated from a Patient in the United States

Rebecca L. Lindsey, Dhwani Batra, Lori Rowe, Vladimir N. Loparev, Devon Stripling, Lisley Garcia-Toledo, Kristen Knipe, Phalasy Juieng, Mili Sheth, Haley Martin, Alison Laufer Halpin

Genome Announc. 2017 Mar; 5(11): e01725-16. Published online 2017 Mar 16. doi: 10.1128/genomeA.01725-16

PMCID:: PMC5356065

Abstract Article PDF–121K

Select item 49295157.

High-Quality Draft Genome Sequences for Five Non-O157 Shiga Toxin-Producing Escherichia coli Strains Generated with PacBio Sequencing and Optical Maps

Rebecca L. Lindsey, Lori Rowe, Lisley Garcia-Toledo, Vladimir Loparev, Kristen Knipe, Devon Stripling, Haley Martin, Eija Trees, Phalasy Juieng, Dhwani Batra, Nancy Strockbine

Genome Announc. 2016 May-Jun; 4(3): e00626-16. Published online 2016 Jun 30. doi: 10.1128/genomeA.00626-16

PMCID:: PMC4929515

Abstract Article PDF–137K

Select item 46832438.

Complete Genome Sequences of Two Shiga Toxin-Producing Escherichia coli Strains from Serotypes O119:H4 and O165:H25

Rebecca L. Lindsey, Kristen Knipe, Lori Rowe, Lisley Garcia-Toledo, Vladimir Loparev, Phalasy Juieng, Eija Trees, Nancy Strockbine, Devon Stripling, Peter Gerner-Smidt

Genome Announc. 2015 Nov-Dec; 3(6): e01496-15. Published online 2015 Dec 17. doi: 10.1128/genomeA.01496-15

PMCID:: PMC4683243

Abstract Article PDF–144K

Select item 44570599.

Draft Whole-Genome Sequences of 10 Enterotoxigenic Escherichia coli Serogroup O6 Strains

Vaishnavi Pattabiraman, Cheryl A. Bopp

Genome Announc. 2015 May-Jun; 3(3): e00564-15. Published online 2015 Jun 4. doi: 10.1128/genomeA.00564-15

Correction in:: Genome Announc. 2016 May-Jun; 4(3): e00397-16.

PMCID:: PMC4457059

Abstract Article PDF–151K

Select item 412576510.

Genome Sequences of 228 Shiga Toxin-Producing Escherichia coli Isolates and 12 Isolates Representing Other Diarrheagenic E. coli Pathotypes

Eija Trees, Nancy Strockbine, Shankar Changayil, Satishkumar Ranganathan, Kun Zhao, Ryan Weil, Duncan MacCannell, Ashley Sabol, Amber Schmidtke, Haley Martin, Devon Stripling, Efrain M. Ribot, Peter Gerner-Smidt

Genome Announc. 2014 Jul-Aug; 2(4): e00718-14. Published online 2014 Aug 7. doi: 10.1128/genomeA.00718-14

PMCID:: PMC4125765

Abstract Article PDF–212K

Select item 411076511.

Draft Whole-Genome Sequences of Nine Non-O157 Shiga Toxin-Producing Escherichia coli Strains

Rebecca L. Lindsey, Eija Trees, Scott Sammons, Vladimir Loparev, Mike Frace, Nancy Strockbine, Ashley L. Sabol, Evan Sowers, Devon Stripling, Haley Martin, Kristen Knipe, Lori Rowe, Peter Gerner-Smidt

Genome Announc. 2014 Jul-Aug; 2(4): e00501-14. Published online 2014 Jul 10. doi: 10.1128/genomeA.00501-14