PMC Links for Taxonomy (Select 19) - PMC

Shinya Watanabe, Bintao Cui, Kotaro Kiga, Yoshifumi Aiba, Xin-Ee Tan, Yusuke Sato’o, Moriyuki Kawauchi, Tanit Boonsiri, Kanate Thitiananpakorn, Yusuke Taki, Fen-Yu Li, Aa Haeruman Azam, Yumi Nakada, Teppei Sasahara, Longzhu Cui

Front Microbiol. 2019; 10: 2838. Published online 2019 Dec 10. doi: 10.3389/fmicb.2019.02838

Correction in:: Front Microbiol. 2020; 11: 179.

PMCID:: PMC6914741

Abstract Article PDF–7.4M

Select item 63619834.

Anaerobic degradation of hexadecane and phenanthrene coupled to sulfate reduction by enriched consortia from northern Gulf of Mexico seafloor sediment

Boryoung Shin, Minjae Kim, Karsten Zengler, Kuk-Jeong Chin, Will A. Overholt, Lisa M. Gieg, Konstantinos T. Konstantinidis, Joel E. Kostka

Sci Rep. 2019; 9: 1239. Published online 2019 Feb 4. doi: 10.1038/s41598-018-36567-x

PMCID:: PMC6361983

Abstract Article PDF–2.3M

Select item 63316295.

Deltaproteobacteria (Pelobacter) and Methanococcoides are responsible for choline-dependent methanogenesis in a coastal saltmarsh sediment

Eleanor Jameson, Jason Stephenson, Helen Jones, Andrew Millard, Anne-Kristin Kaster, Kevin J. Purdy, Ruth Airs, J. Colin Murrell, Yin Chen

ISME J. 2019 Feb; 13(2): 277–289. Published online 2018 Sep 11. doi: 10.1038/s41396-018-0269-8

PMCID:: PMC6331629

Abstract Article PDF–1.1M

Select item 63151386.

Electron and Proton Flux for Carbon Dioxide Reduction in Methanosarcina barkeri During Direct Interspecies Electron Transfer

Dawn E. Holmes, Amelia-Elena Rotaru, Toshiyuki Ueki, Pravin M. Shrestha, James G. Ferry, Derek R. Lovley

Front Microbiol. 2018; 9: 3109. Published online 2018 Dec 13. doi: 10.3389/fmicb.2018.03109

PMCID:: PMC6315138

Abstract Article PDF–1.0M

Select item 62007757.

Methodological considerations for the identification of choline and carnitine-degrading bacteria in the gut

Eleanor Jameson, Mussa Quareshy, Yin Chen

Methods. 2018 Oct 1; 149: 42–48. doi: 10.1016/j.ymeth.2018.03.012

PMCID:: PMC6200775

Abstract Article

Select item 60854378.

Origin and Evolution of Flavin-Based Electron Bifurcating Enzymes

Saroj Poudel, Eric C. Dunham, Melody R. Lindsay, Maximiliano J. Amenabar, Elizabeth M. Fones, Daniel R. Colman, Eric S. Boyd

Front Microbiol. 2018; 9: 1762. Published online 2018 Aug 3. doi: 10.3389/fmicb.2018.01762

PMCID:: PMC6085437

Abstract Article PDF–3.4M

Select item 60706379.

Study the Features of 57 Confirmed CRISPR Loci in 38 Strains of Staphylococcus aureus

Xihong Zhao, Zhixue Yu, Zhenbo Xu

Front Microbiol. 2018; 9: 1591. Published online 2018 Jul 26. doi: 10.3389/fmicb.2018.01591

PMCID:: PMC6070637

Abstract Article PDF–1.6M

Select item 606024810.

Diversity and Evolution of Myxobacterial Type IV Pilus Systems

Gaurav Sharma, Lori L. Burrows, Mitchell Singer

Front Microbiol. 2018; 9: 1630. Published online 2018 Jul 19. doi: 10.3389/fmicb.2018.01630

PMCID:: PMC6060248

Abstract Article PDF–5.6M

Select item 605214711.

Jellyfish Life Stages Shape Associated Microbial Communities, While a Core Microbiome Is Maintained Across All

Michael D. Lee, Joshua D. Kling, Rubén Araya, Janja Ceh

Front Microbiol. 2018; 9: 1534. Published online 2018 Jul 12. doi: 10.3389/fmicb.2018.01534

PMCID:: PMC6052147

Abstract Article PDF–1.6M

Select item 598694712.

nifPred: Proteome-Wide Identification and Categorization of Nitrogen-Fixation Proteins of Diaztrophs Based on Composition-Transition-Distribution Features Using Support Vector Machine

Prabina K. Meher, Tanmaya K. Sahu, Jyotilipsa Mohanty, Shachi Gahoi, Supriya Purru, Monendra Grover, Atmakuri R. Rao

Front Microbiol. 2018; 9: 1100. Published online 2018 May 29. doi: 10.3389/fmicb.2018.01100

PMCID:: PMC5986947

Abstract Article PDF–3.1M

Select item 597148213.

Association of ω with the C-Terminal Region of the β′ Subunit Is Essential for Assembly of RNA Polymerase in Mycobacterium tuberculosis

Chunyou Mao, Yan Zhu, Pei Lu, Lipeng Feng, Shiyun Chen, Yangbo Hu

J Bacteriol. 2018 Jun 15; 200(12): e00159-18. Prepublished online 2018 Apr 9. Published online 2018 May 24. doi: 10.1128/JB.00159-18

PMCID:: PMC5971482

Abstract Article PDF–2.3M

Select item 588107614.

Common Hydraulic Fracturing Fluid Additives Alter the Structure and Function of Anaerobic Microbial Communities

Adam C. Mumford, Denise M. Akob, J. Grace Klinges, Isabelle M. Cozzarelli

Appl Environ Microbiol. 2018 Apr 15; 84(8): e02729-17. Prepublished online 2018 Feb 16. Published online 2018 Apr 2. doi: 10.1128/AEM.02729-17

PMCID:: PMC5881076

Abstract Article PDF–412K

Select item 587464115.

Responses of Salt Marsh Plant Rhizosphere Diazotroph Assemblages to Drought

Debra A. Davis, Sparkle L. Malone, Charles R. Lovell

Microorganisms. 2018 Mar; 6(1): 27. Published online 2018 Mar 15. doi: 10.3390/microorganisms6010027

PMCID:: PMC5874641

Abstract Article PDF–5.9M

Select item 580948516.

Metagenomic Profiling of Soil Microbes to Mine Salt Stress Tolerance Genes

Vasim Ahmed, Manoj K. Verma, Shashank Gupta, Vibha Mandhan, Nar S. Chauhan

Front Microbiol. 2018; 9: 159. Published online 2018 Feb 8. doi: 10.3389/fmicb.2018.00159

PMCID:: PMC5809485

Abstract Article PDF–1.5M

Select item 570591517.

Microbial Community Structure and Arsenic Biogeochemistry in Two Arsenic-Impacted Aquifers in Bangladesh

Edwin T. Gnanaprakasam, Jonathan R. Lloyd, Christopher Boothman, Kazi Matin Ahmed, Imtiaz Choudhury, Benjamin C. Bostick, Alexander van Geen, Brian J. Mailloux

mBio. 2017 Nov-Dec; 8(6): e01326-17. Published online 2017 Nov 28. doi: 10.1128/mBio.01326-17

PMCID:: PMC5705915

Abstract Article PDF–1.8M

Select item 568792018.

Chromosomal Targeting by the Type III-A CRISPR-Cas System Can Reshape Genomes in Staphylococcus aureus

Jing Guan, Wanying Wang, Baolin Sun

mSphere. 2017 Nov-Dec; 2(6): e00403-17. Published online 2017 Nov 15. doi: 10.1128/mSphere.00403-17

PMCID:: PMC5687920

Abstract Article PDF–3.8M

Select item 566080119.

Comparative Metagenomic Analysis of Electrogenic Microbial Communities in Differentially Inoculated Swine Wastewater-Fed Microbial Fuel Cells

Irina V. Khilyas, Anatoly A. Sorokin, Larisa Kiseleva, David J. W. Simpson, V. Fedorovich, Margarita R. Sharipova, Mami Kainuma, Michael F. Cohen, Igor Goryanin

Scientifica (Cairo) 2017; 2017: 7616359. Published online 2017 Oct 12. doi: 10.1155/2017/7616359

PMCID:: PMC5660801

Abstract Article PDF–1.9M

Select item 556130120.

Detection of Diazotrophy in the Acetylene-Fermenting Anaerobe Pelobacter sp. Strain SFB93

Denise M. Akob, Shaun M. Baesman, John M. Sutton, Janna L. Fierst, Adam C. Mumford, Yesha Shrestha, Amisha T. Poret-Peterson, Stacy Bennett, Darren S. Dunlap, Karl B. Haase, Ronald S. Oremland

Appl Environ Microbiol. 2017 Sep 1; 83(17): e01198-17. Prepublished online 2017 Jun 30. Published online 2017 Aug 17. doi: 10.1128/AEM.01198-17