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Items: 16

1.
How genome complexity can explain the difficulty of aligning reads to genomes
Vinhthuy Phan, Shanshan Gao, Quang Tran, Nam S Vo
BMC Bioinformatics. 2015; 16(Suppl 17): S3. Published online 2015 Dec 7. doi: 10.1186/1471-2105-16-S17-S3
PMCID:
PMC4674900
AbstractArticlePDF–2.1M
2.
Calcium dependent regulation of Rab activation and vesicle fusion by an intracellular P2X ion channel
Katie Parkinson, Abigail E. Baines, Thomas Keller, Nicole Gruenheit, Laricia Bragg, R. Alan North, Christopher R.L. Thompson
Nat Cell Biol. Author manuscript; available in PMC 2014 Jul 1.
Published in final edited form as: Nat Cell Biol. 2014 Jan; 16(1): 87–98. Published online 2013 Dec 15. doi: 10.1038/ncb2887
PMCID:
PMC3942655
AbstractArticlePDF–6.1M
3.
SNP Discovery in the Transcriptome of White Pacific Shrimp Litopenaeus vannamei by Next Generation Sequencing
Yang Yu, Jiankai Wei, Xiaojun Zhang, Jingwen Liu, Chengzhang Liu, Fuhua Li, Jianhai Xiang
PLoS One. 2014; 9(1): e87218. Published online 2014 Jan 30. doi: 10.1371/journal.pone.0087218
PMCID:
PMC3907553
AbstractArticlePDF–1.0M
4.
Whole genome duplication events in plant evolution reconstructed and predicted using myosin motor proteins
Stefanie Mühlhausen, Martin Kollmar
BMC Evol Biol. 2013; 13: 202. Published online 2013 Sep 22. doi: 10.1186/1471-2148-13-202
PMCID:
PMC3850447
AbstractArticlePDF–3.3M
5.
Genomic and expression analysis of a solute carrier protein (CcSLC25a5) gene from Cyprinus carpio Linnaeus
Li Jiang, Anda Cheng, Yangyang Wang, Baoyong Zhang
Springerplus. 2013; 2: 458. Published online 2013 Sep 12. doi: 10.1186/2193-1801-2-458
PMCID:
PMC3795872
AbstractArticlePDF–1.0M
6.
Eukaryote to gut bacteria transfer of a glycoside hydrolase gene essential for starch breakdown in plants
Maria Cecilia Arias, Étienne G.J. Danchin, Pedro Coutinho, Bernard Henrissat, Steven Ball
Mob Genet Elements. 2012 Mar 1; 2(2): 81–87. doi: 10.4161/mge.20375
PMCID:
PMC3429525
AbstractArticlePDF–1.7M
7.
Nutrient-regulated transcriptional responses in the brown tide forming alga Aureococcus anophagefferens
Louie L. Wurch, Sheean T. Haley, Elizabeth D. Orchard, Christopher J. Gobler, Sonya T. Dyhrman
Environ Microbiol. Author manuscript; available in PMC 2012 Feb 20.
Published in final edited form as: Environ Microbiol. 2011 Feb; 13(2): 468–481. Published online 2010 Sep 30. doi: 10.1111/j.1462-2920.2010.02351.x
PMCID:
PMC3282463
AbstractArticlePDF–773K
8.
The ancient function of RB-E2F Pathway: insights from its evolutionary history
Lihuan Cao, Bo Peng, Lei Yao, Xinming Zhang, Kuan Sun, Xianmei Yang, Long Yu
Biol Direct. 2010; 5: 55. Published online 2010 Sep 20. doi: 10.1186/1745-6150-5-55
PMCID:
PMC3224931
AbstractArticlePDF–3.2M
9.
“Dicty Dynamics”: Dictyostelium motility as persistent random motion
Liang Li, Edward C. Cox, Henrik Flyvbjerg
Phys Biol. Author manuscript; available in PMC 2012 Aug 1.
Published in final edited form as: Phys Biol. 2011 Aug; 8(4): 046006. Published online 2011 May 25. doi: 10.1088/1478-3975/8/4/046006
PMCID:
PMC3148805
AbstractArticlePDF–1.5M
10.
Functional Promiscuity of Homologues of the Bacterial ArsA ATPases
Rostislav Castillo, Milton H. Saier, Jr.
Int J Microbiol. 2010; 2010: 187373. Published online 2010 Oct 20. doi: 10.1155/2010/187373
PMCID:
PMC2963123
AbstractArticlePDF–1.5M
11.
The Homeodomain Resource: a comprehensive collection of sequence, structure, interaction, genomic and functional information on the homeodomain protein family
R. Travis Moreland, Joseph F. Ryan, Christopher Pan, Andreas D. Baxevanis
Database (Oxford) 2009; 2009: bap004. Published online 2009 Apr 17. doi: 10.1093/database/bap004
PMCID:
PMC2790301
AbstractArticlePDF–767K
12.
Identification and expression of differentially expressed genes in the hard clam, Mercenaria mercenaria, in response to quahog parasite unknown (QPX)
Mickael Perrigault, Arnaud Tanguy, Bassem Allam
BMC Genomics. 2009; 10: 377. Published online 2009 Aug 14. doi: 10.1186/1471-2164-10-377
PMCID:
PMC2752465
AbstractArticlePDF–437K
13.
Improved Prediction of Malaria Degradomes by Supervised Learning with SVM and Profile Kernel
Rui Kuang, Jianying Gu, Hong Cai, Yufeng Wang
Genetica. Author manuscript; available in PMC 2010 May 1.
Published in final edited form as: Genetica. 2009 May; 136(1): 189–209. Published online 2008 Dec 6. doi: 10.1007/s10709-008-9336-9
Correction in:
volume 137 on page 243
PMCID:
PMC2721224
AbstractArticlePDF–2.3M
14.
Phylogenetic analysis of the SAP30 family of transcriptional regulators reveals functional divergence in the domain that binds the nuclear matrix
Keijo M Viiri, Taisto YK Heinonen, Markku Mäki, Olli Lohi
BMC Evol Biol. 2009; 9: 149. Published online 2009 Jun 30. doi: 10.1186/1471-2148-9-149
PMCID:
PMC2711940
AbstractArticlePDF–1.7M
15.
The evolutionary origin of the Runx/CBFbeta transcription factors – Studies of the most basal metazoans
James C Sullivan, Daniel Sher, Miriam Eisenstein, Katsuya Shigesada, Adam M Reitzel, Heather Marlow, Ditsa Levanon, Yoram Groner, John R Finnerty, Uri Gat
BMC Evol Biol. 2008; 8: 228. Published online 2008 Aug 5. doi: 10.1186/1471-2148-8-228
PMCID:
PMC2527000
AbstractArticlePDF–6.3M
16.
Unexpected complexity of the Aquaporin gene family in the moss Physcomitrella patens
Jonas ÅH Danielson, Urban Johanson
BMC Plant Biol. 2008; 8: 45. Published online 2008 Apr 22. doi: 10.1186/1471-2229-8-45
PMCID:
PMC2386804
AbstractArticlePDF–652K

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