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Items: 8

1.
Assessing the performance of different approaches for functional and taxonomic annotation of metagenomes
Javier Tamames, Marta Cobo-Simón, Fernando Puente-Sánchez
BMC Genomics. 2019; 20: 960. Published online 2019 Dec 10. doi: 10.1186/s12864-019-6289-6
PMCID:
PMC6902526
AbstractArticlePDF–4.0M
2.
Aerobic proteobacterial methylotrophs in Movile Cave: genomic and metagenomic analyses
Deepak Kumaresan, Jason Stephenson, Andrew C. Doxey, Hina Bandukwala, Elliot Brooks, Alexandra Hillebrand-Voiculescu, Andrew S. Whiteley, J Colin Murrell
Microbiome. 2018; 6: 1. Published online 2018 Jan 2. doi: 10.1186/s40168-017-0383-2
PMCID:
PMC5748958
AbstractArticlePDF–2.4M
3.
Inner workings of thrombolites: spatial gradients of metabolic activity as revealed by metatranscriptome profiling
J. M. Mobberley, C. L. M. Khodadad, P. T. Visscher, R. P. Reid, P. Hagan, J. S. Foster
Sci Rep. 2015; 5: 12601. Published online 2015 Jul 27. doi: 10.1038/srep12601
PMCID:
PMC4515876
AbstractArticlePDF–1.0M
4.
Microbial Life in a Fjord: Metagenomic Analysis of a Microbial Mat in Chilean Patagonia
Juan A. Ugalde, Maria J. Gallardo, Camila Belmar, Práxedes Muñoz, Nathaly Ruiz-Tagle, Sandra Ferrada-Fuentes, Carola Espinoza, Eric E. Allen, Victor A. Gallardo
PLoS One. 2013; 8(8): e71952. Published online 2013 Aug 28. doi: 10.1371/journal.pone.0071952
PMCID:
PMC3756073
AbstractArticlePDF–1.4M
5.
Comparative Metagenomics of Two Microbial Mats at Cuatro Ciénegas Basin II: Community Structure and Composition in Oligotrophic Environments
Germán Bonilla-Rosso, Mariana Peimbert, Luis David Alcaraz, Ismael Hernández, Luis E. Eguiarte, Gabriela Olmedo-Alvarez, Valeria Souza
Astrobiology. 2012 Jul; 12(7): 659–673. doi: 10.1089/ast.2011.0724
PMCID:
PMC3426889
AbstractArticlePDF–931K
6.
The effect of sequencing errors on metagenomic gene prediction
Katharina J Hoff
BMC Genomics. 2009; 10: 520. Published online 2009 Nov 12. doi: 10.1186/1471-2164-10-520
PMCID:
PMC2781827
AbstractArticlePDF–285K
7.
UFO: a web server for ultra-fast functional profiling of whole genome protein sequences
Peter Meinicke
BMC Genomics. 2009; 10: 409. Published online 2009 Sep 2. doi: 10.1186/1471-2164-10-409
PMCID:
PMC2744726
AbstractArticlePDF–784K
8.
Orphelia: predicting genes in metagenomic sequencing reads
Katharina J. Hoff, Thomas Lingner, Peter Meinicke, Maike Tech
Nucleic Acids Res. 2009 Jul 1; 37(Web Server issue): W101–W105. Published online 2009 May 8. doi: 10.1093/nar/gkp327
PMCID:
PMC2703946
AbstractArticlePDF–1.9M

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