PMC Links for Taxonomy (Select 7918) - PMC

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Select item 70569781.

Genome Sequence of the Euryhaline Javafish Medaka, Oryzias javanicus: A Small Aquarium Fish Model for Studies on Adaptation to Salinity

Yusuke Takehana, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, Olivier Bouchez, Cécile Donnadieu, Celia Barrachina, Laurent Journot, Mari Kawaguchi, Shigeki Yasumasu, Satoshi Ansai, Kiyoshi Naruse, Koji Inoue, Chuya Shinzato, Manfred Schartl, Yann Guiguen, Amaury Herpin

G3 (Bethesda) 2020 Mar; 10(3): 907–915. Published online 2020 Jan 27. doi: 10.1534/g3.119.400725

PMCID:: PMC7056978

Abstract Article PDF–1.3M

Select item 70283672.

Synteny-based analyses indicate that sequence divergence is not the main source of orphan genes

Nikolaos Vakirlis, Anne-Ruxandra Carvunis, Aoife McLysaght

eLife. 2020; 9: e53500. Published online 2020 Feb 18. doi: 10.7554/eLife.53500

PMCID:: PMC7028367

Abstract Article PDF–4.0M

Select item 70146663.

Expansion of sweet taste receptor genes in grass carp (Ctenopharyngodon idellus) coincided with vegetarian adaptation

Xiao-Chen Yuan, Xu-Fang Liang, Wen-Jing Cai, Shan He, Wen-Jie Guo, Kang-Sen Mai

BMC Evol Biol. 2020; 20: 25. Published online 2020 Feb 11. doi: 10.1186/s12862-020-1590-1

PMCID:: PMC7014666

Abstract Article PDF–2.6M

Select item 70140124.

Vertebrate Alpha2,8-Sialyltransferases (ST8Sia): A Teleost Perspective

Marzia Tindara Venuto, Mathieu Decloquement, Joan Martorell Ribera, Maxence Noel, Alexander Rebl, Virginie Cogez, Daniel Petit, Sebastian Peter Galuska, Anne Harduin-Lepers

Int J Mol Sci. 2020 Jan; 21(2): 513. Published online 2020 Jan 14. doi: 10.3390/ijms21020513

PMCID:: PMC7014012

Abstract Article PDF–3.9M

Select item 70038315.

Genomic footprints of a biological invasion: Introduction from Asia and dispersal in Europe of the topmouth gudgeon (Pseudorasbora parva)

Miguel Baltazar‐Soares, Simon Blanchet, Julien Cote, Ali S. Tarkan, Eva Záhorská, Rodolphe E. Gozlan, Christophe Eizaguirre

Mol Ecol. 2020 Jan; 29(1): 71–85. Published online 2019 Dec 10. doi: 10.1111/mec.15313

PMCID:: PMC7003831

Abstract Article PDF–913K

Select item 69971836.

Divergent genes encoding the putative receptors for growth hormone and prolactin in sea lamprey display distinct patterns of expression

Ningping Gong, Diogo Ferreira-Martins, Stephen D. McCormick, Mark A. Sheridan

Sci Rep. 2020; 10: 1674. Published online 2020 Feb 3. doi: 10.1038/s41598-020-58344-5

PMCID:: PMC6997183

Abstract Article PDF–2.0M

Select item 69935237.

Transcriptomic analysis of dead end knockout testis reveals germ cell and gonadal somatic factors in Atlantic salmon

Lene Kleppe, Rolf Brudvik Edvardsen, Tomasz Furmanek, Eva Andersson, Kai Ove Skaftnesmo, Frida Thyri Segafredo, Anna Wargelius

BMC Genomics. 2020; 21: 99. Published online 2020 Jan 30. doi: 10.1186/s12864-020-6513-4

PMCID:: PMC6993523

Abstract Article PDF–5.8M

Select item 69919598.

Duplication and subfunctionalisation of the general transcription factor IIIA (gtf3a) gene in teleost genomes, with ovarian specific transcription of gtf3ab

Iratxe Rojo-Bartolomé, Jorge Estefano Santana de Souza, Oihane Diaz de Cerio, Ibon Cancio

PLoS One. 2020; 15(1): e0227690. Published online 2020 Jan 30. doi: 10.1371/journal.pone.0227690

PMCID:: PMC6991959

Abstract Article PDF–2.4M

Select item 69883519.

The round goby genome provides insights into mechanisms that may facilitate biological invasions

Irene Adrian-Kalchhauser, Anders Blomberg, Tomas Larsson, Zuzana Musilova, Claire R. Peart, Martin Pippel, Monica Hongroe Solbakken, Jaanus Suurväli, Jean-Claude Walser, Joanna Yvonne Wilson, Magnus Alm Rosenblad, Demian Burguera, Silvia Gutnik, Nico Michiels, Mats Töpel, Kirill Pankov, Siegfried Schloissnig, Sylke Winkler

BMC Biol. 2020; 18: 11. Published online 2020 Jan 28. doi: 10.1186/s12915-019-0731-8

PMCID:: PMC6988351

Abstract Article PDF–7.2M

Select item 698435910.

Evolutionary History of GLIS Genes Illuminates Their Roles in Cell Reprograming and Ciliogenesis

Yuuri Yasuoka, Masahito Matsumoto, Ken Yagi, Yasushi Okazaki

Mol Biol Evol. 2020 Jan; 37(1): 100–109. Published online 2019 Sep 5. doi: 10.1093/molbev/msz205

PMCID:: PMC6984359

Abstract Article PDF–2.6M

Select item 697862811.

Emergence and Evolution of ERM Proteins and Merlin in Metazoans

Victoria Shabardina, Yukie Kashima, Yutaka Suzuki, Wojciech Makalowski

Genome Biol Evol. 2020 Jan; 12(1): 3710–3724. Published online 2019 Dec 12. doi: 10.1093/gbe/evz265

PMCID:: PMC6978628

Abstract Article PDF–6.7M

Select item 697448312.

The lhfpl5 Ohnologs lhfpl5a and lhfpl5b Are Required for Mechanotransduction in Distinct Populations of Sensory Hair Cells in Zebrafish

Timothy Erickson, Itallia V. Pacentine, Alexandra Venuto, Rachel Clemens, Teresa Nicolson

Front Mol Neurosci. 2019; 12: 320. Published online 2020 Jan 15. doi: 10.3389/fnmol.2019.00320

PMCID:: PMC6974483

Abstract Article PDF–4.7M

Select item 694074913.

A Comparative Genomic and Transcriptional Survey Providing Novel Insights into Bone Morphogenetic Protein 2 (bmp2) in Fishes

Guang Yang, Zhendong Qin, Hongyan Kou, Rishen Liang, Lijuan Zhao, Shoujia Jiang, Li Lin, Kai Zhang

Int J Mol Sci. 2019 Dec; 20(24): 6137. Published online 2019 Dec 5. doi: 10.3390/ijms20246137

PMCID:: PMC6940749

Abstract Article PDF–5.3M

Select item 693619414.

Comparative Genomics Reveals Accelerated Evolution of Fright Reaction Genes in Ostariophysan Fishes

Liandong Yang, Haifeng Jiang, Juan Chen, Yi Lei, Ning Sun, Wenqi Lv, Thomas J. Near, Shunping He

Front Genet. 2019; 10: 1283. Published online 2019 Dec 23. doi: 10.3389/fgene.2019.01283

PMCID:: PMC6936194

Abstract Article PDF–3.4M

Select item 690957515.

Nucleotide composition of transposable elements likely contributes to AT/GC compositional homogeneity of teleost fish genomes

Radka Symonová, Alexander Suh

Mob DNA. 2019; 10: 49. Published online 2019 Dec 12. doi: 10.1186/s13100-019-0195-y

PMCID:: PMC6909575

Abstract Article PDF–995K

Select item 690785216.

Application of DArT seq derived SNP tags for comparative genome analysis in fishes; An alternative pipeline using sequence data from a non-traditional model species, Macquaria ambigua

Foyez Shams, Fiona Dyer, Ross Thompson, Richard P. Duncan, Jason D. Thiem, Andrzej Kilian, Tariq Ezaz

PLoS One. 2019; 14(12): e0226365. Published online 2019 Dec 12. doi: 10.1371/journal.pone.0226365

PMCID:: PMC6907852

Abstract Article PDF–1.1M

Select item 690421717.

Retinal oxygen supply shaped the functional evolution of the vertebrate eye

Christian Damsgaard, Henrik Lauridsen, Anette MD Funder, Jesper S Thomsen, Thomas Desvignes, Dane A Crossley, II, Peter R Møller, Do TT Huong, Nguyen T Phuong, H William Detrich, III, Annemarie Brüel, Horst Wilkens, Eric Warrant, Tobias Wang, Jens R Nyengaard, Michael Berenbrink, Mark Bayley

eLife. 2019; 8: e52153. Published online 2019 Dec 10. doi: 10.7554/eLife.52153