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Human immunodeficiency virus 1 gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds.

PopSet: 86560153

GenBank FASTA

Study Details

Distinguishing molecular forms of HIV-1 in Asia with a high-throughput, fluorescent genotyping assay, MHAbce v.2.

Kijak,G.H., Tovanabutra,S., Sanders-Buell,E., Watanaveeradej,V., de Souza,M.S., Nelson,K.E., Ketsararat,V., Gulgolgarn,V., Wera-arpachai,M., Sriplienchan,S., Khamboonrueng,C., Birx,D.L., Robb,M.L. and McCutchan,F.E.

(02-05-2007) Virology 358:(1)178-191

PMID:
16997343
Citation

Sequences in this data set

  • DQ354121.1HIV-1 isolate M171 subtype CRF01_AE/B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
  • DQ354120.1HIV-1 isolate M169 subtype CRF15_01B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
  • DQ354119.1HIV-1 isolate M149 subtype B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
  • DQ354118.1HIV-1 isolate M145 subtype B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
  • DQ354117.1HIV-1 isolate M114 subtype CRF01_AE from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
  • DQ354116.1HIV-1 isolate M081 subtype B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
  • DQ354115.1HIV-1 isolate M005 subtype CRF01_AE/B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds
  • DQ354114.1HIV-1 isolate M041 subtype B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), and envelope glycoprotein (env) genes, complete cds; and nef protein (nef) gene, partial cds
  • DQ354113.1HIV-1 isolate M043 subtype CRF01_AE/B from Thailand gag protein (gag) and pol protein (pol) genes, partial cds; and vif protein (vif), vpr protein (vpr), tat protein (tat), rev protein (rev), vpu protein (vpu), envelope glycoprotein (env), and nef protein (nef) genes, complete cds

Alignment

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  • Protein
    Protein component of population set
  • PubMed
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  • Taxonomy
    Taxonomy sequences associated with popset record
  • PopSet
    sets from the same publication
  • Nucleotide
    Nucleotide component of population set

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