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Ara tricolor control region, tRNA-Phe, 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, and tRNA-Leu genes, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRNA-Gln, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; cytochrome c oxidase subunit I (COX1) gene, complete cds; tRNA-Ser and tRNA-Asp genes, complete sequence; cytochrome c oxidase subunit II (COX2) gene, complete cds; tRNA-Lys gene, complete sequence; ATP synthase F0 subunit 8 (ATP8), ATP synthase F0 subunit 6 (ATP6), and cytochrome c oxidase subunit III (COX3) genes, complete cds; tRNA-Gly gene, complete sequence; NADH dehydrogenase subunit 3 (ND3) gene, complete cds; tRNA-Arg gene, complete sequence; NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; tRNA-His, tRNA-Ser, and tRNA-Leu genes, complete sequence; NADH dehydrogenase subunit 5 (ND5) and cytochrome b (CYTB) genes, complete cds; tRNA-Thr and tRNA-Pro genes, complete sequence; NADH dehydrogenase subunit 6 (ND6) gene, complete cds; and tRNA-Glu gene and D-loop, complete sequence; mitochondrial.

PopSet: 1386810888

Study Details

The phylogenetic position of the extinct Cuban Macaw Ara tricolor based on complete mitochondrial genome sequences

Johansson,U.S., Ericson,P.G.P., Blom,M.P.K. and Irestedt,M.

(2018) Ibis (Lond. 1859)

Sequences in this data set

  • MG432917.1Ara tricolor isolate Atri523094 mitochondrion, complete genome
  • MG432916.1Ara tricolor isolate Atri569592 mitochondrion, complete genome

Alignment

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  • Ara tricolor control region, tRNA-Phe, 12S ribosomal RNA, tRNA-Val, 16S ribosoma...
    Ara tricolor control region, tRNA-Phe, 12S ribosomal RNA, tRNA-Val, 16S ribosomal RNA, and tRNA-Leu genes, complete sequence; NADH dehydrogenase subunit 1 (ND1) gene, complete cds; tRNA-Ile, tRNA-Gln, and tRNA-Met genes, complete sequence; NADH dehydrogenase subunit 2 (ND2) gene, complete cds; tRNA-Trp, tRNA-Ala, tRNA-Asn, tRNA-Cys, and tRNA-Tyr genes, complete sequence; cytochrome c oxidase subunit I (COX1) gene, complete cds; tRNA-Ser and tRNA-Asp genes, complete sequence; cytochrome c oxidase subunit II (COX2) gene, complete cds; tRNA-Lys gene, complete sequence; ATP synthase F0 subunit 8 (ATP8), ATP synthase F0 subunit 6 (ATP6), and cytochrome c oxidase subunit III (COX3) genes, complete cds; tRNA-Gly gene, complete sequence; NADH dehydrogenase subunit 3 (ND3) gene, complete cds; tRNA-Arg gene, complete sequence; NADH dehydrogenase subunit 4L (ND4L) and NADH dehydrogenase subunit 4 (ND4) genes, complete cds; tRNA-His, tRNA-Ser, and tRNA-Leu genes, complete sequence; NADH dehydrogenase subunit 5 (ND5) and cytochrome b (CYTB) genes, complete cds; tRNA-Thr and tRNA-Pro genes, complete sequence; NADH dehydrogenase subunit 6 (ND6) gene, complete cds; and tRNA-Glu gene and D-loop, complete sequence; mitochondrial.
    PopSet: 1386810888
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