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Links from Protein

Items: 12

1.

UvrB domain 3

Date:
2024-08-14

Family Accession:
NF046890.1
Method:
HMM

2.

SWI2/SNF2 ATPase

A SWi2/SNF2 ATPase found in polyvalent proteins [1]. [1]. 28559295. Polyvalent Proteins, a Pervasive Theme in the Intergenomic. Biological Conflicts of Bacteriophages and Conjugative Elements.. Iyer LM, Burroughs AM, Anand S, de Souza RF, Aravind L;. J Bacteriol. 2017; [Epub ahead of print] (from Pfam)

Date:
2024-08-14

Family Accession:
NF037510.5
Method:
HMM

3.

type I restriction endonuclease

This HMM described the endonuclease domain of HsdR family type I restriction endonucleases. These enzymes also have RecA-like helicase domains.

GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Molecular Function:
endonuclease activity (GO:0004519)
Biological Process:
DNA modification (GO:0006304)
Date:
2024-08-14

Family Accession:
NF016220.5
Method:
HMM

4.

DEAD/DEAH box helicase family protein

GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Molecular Function:
ATP binding (GO:0005524)
Molecular Function:
hydrolase activity (GO:0016787)
Date:
2024-08-14

Family Accession:
NF016724.5
Method:
HMM

5.
new record, indexing in progress
Family Accession:
6.
new record, indexing in progress
Family Accession:
7.
new record, indexing in progress
Family Accession:
8.
new record, indexing in progress
Family Accession:
9.
new record, indexing in progress
Family Accession:
10.
new record, indexing in progress
Family Accession:
11.

type I restriction endonuclease subunit R

type I restriction endonuclease subunit R (HsdR) is required for both nuclease and ATPase activities, but not for modification; belongs to the DEAD/DEAH box helicase superfamily

Date:
2024-07-19

Family Accession:
11427405
Method:
Sparcle

12.

HsdR family type I site-specific deoxyribonuclease

This gene is part of the type I restriction and modification system which is composed of three polypeptides R (restriction endonuclease), M (modification) and S (specificity). This group of enzymes recognize specific short DNA sequences and have an absolute requirement for ATP (or dATP) and S-adenosyl-L-methionine. They also catalyse the reactions of EC 2.1.1.72 and EC 2.1.1.73, with similar site specificity.(J. Mol. Biol. 271 (3), 342-348 (1997)). Members of this family are assumed to differ from each other in DNA site specificity.

GO Terms:
Molecular Function:
DNA binding (GO:0003677)
Molecular Function:
ATP binding (GO:0005524)
Molecular Function:
type I site-specific deoxyribonuclease activity (GO:0009035)
Biological Process:
DNA restriction-modification system (GO:0009307)
Date:
2024-05-16

Family Accession:
TIGR00348.1
Method:
HMM

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