| Species | RefSeq assembly(ies) | Annotation Release | Freeze Date | Status |
|---|---|---|---|---|
| Amia calva (bowfin) | fAmiCal2.hap1 (GCF_036373705.1) | GCF_036373705.1-RS_2024_07 | 2024-07-19 | In sequence databasesIn GeneOn the FTP |
| Chelonus insularis (wasps, ants & bees) | ASM1335770v1 (GCF_013357705.1) | GCF_013357705.1-RS_2024_07 | 2024-07-10 | In sequence databasesOn the FTP |
| Argentina anserina (silverweed cinquefoil) | drPotAnse1.1 (GCF_933775445.1) | GCF_933775445.1-RS_2024_04 | 2024-04-02 | In sequence databasesOn the FTP |
Eukaryotic RefSeq Genome Annotation Status
NCBI uses an automated pipeline to provide annotation on some RefSeq genome records. This page provides information about:
- Eukaryotic RefSeq genomes currently in the NCBI annotation pipeline
- Eukaryotic RefSeq genome annotations that were recently released
Another page shows all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each. If you do not see your genome of interest in these tables, please read the annotation policy and then make an annotation request.
Annotation runs in progress
An annotation run is marked in progress until the data produced is available in the sequence databases, in Gene and on the FTP site.
Recently completed annotation runs
Genomes annotated in the past 6 weeks.
FTP - FTP DownloadB - Organism-specific BLASTAR - Annotation ReportGDV - Genome Data Viewer
| Species | RefSeq assembly(ies) | Annotation Release | Freeze Date | Release Date | Links | |||
|---|---|---|---|---|---|---|---|---|
| Hoplias malabaricus (trahira) | fHopMal1.hap1 (GCF_029633855.1) | GCF_029633855.1-RS_2024_07 | 2024-07-19 | 2024-07-22 | FTP | B | AR | GDV |
| Eleutherodactylus coqui (Puerto Rican coqui) | aEleCoq1.hap1 (GCF_035609145.1) | GCF_035609145.1-RS_2024_07 | 2024-07-19 | 2024-07-22 | FTP | B | AR | GDV |
| Tiliqua scincoides (lizards & snakes) | rTilSci1.hap2 (GCF_035046505.1) | GCF_035046505.1-RS_2024_07 | 2024-07-19 | 2024-07-22 | FTP | B | AR | GDV |
| Molothrus aeneus (bronzed cowbird) | BPBGC_Maene_1.0 (GCF_037042795.1) | GCF_037042795.1-RS_2024_07 | 2024-07-12 | 2024-07-17 | FTP | B | AR | GDV |
| Miscanthus floridulus (monocots) | ASM1932011v1 (GCF_019320115.1) | GCF_019320115.1-RS_2024_07 | 2024-07-10 | 2024-07-17 | FTP | B | AR | GDV |
| Symphalangus syndactylus (siamang) | NHGRI_mSymSyn1-v2.1_pri (GCF_028878055.3) | GCF_028878055.3-RS_2024_07 | 2024-07-16 | 2024-07-17 | FTP | B | AR | GDV |
| Branchiostoma lanceolatum (amphioxus) | klBraLanc5.hap2 (GCF_035083965.1) | GCF_035083965.1-RS_2024_07 | 2024-07-12 | 2024-07-16 | FTP | B | AR | GDV |
| Euwallacea similis (beetles) | ESF131.1 (GCF_039881205.1) | GCF_039881205.1-RS_2024_07 | 2024-07-12 | 2024-07-15 | FTP | AR | GDV | |
| Venturia canescens (wasps, ants & bees) | ASM1945775v1 (GCF_019457755.1) | GCF_019457755.1-RS_2024_07 | 2024-07-11 | 2024-07-12 | FTP | B | AR | GDV |
| Oryza sativa Japonica Group (Japanese rice) | ASM3414082v1 (GCF_034140825.1) | GCF_034140825.1-RS_2024_06 | 2024-06-21 | 2024-07-10 | FTP | B | AR | GDV |
| Saccopteryx leptura (lesser sac-winged bat) | mSacLep1_pri_phased_curated (GCF_036850995.1) | GCF_036850995.1-RS_2024_07 | 2024-07-09 | 2024-07-10 | FTP | B | AR | GDV |
| Saccopteryx bilineata (greater sac-winged bat) | mSacBil1_pri_phased_curated (GCF_036850765.1) | GCF_036850765.1-RS_2024_07 | 2024-07-03 | 2024-07-09 | FTP | B | AR | GDV |
| Sylvia atricapilla (blackcap) | bSylAtr1.pri (GCF_009819655.1) | GCF_009819655.1-RS_2024_07 | 2024-07-03 | 2024-07-09 | FTP | B | AR | GDV |
| Euwallacea fornicatus (beetles) | ASM4011564v1 (GCF_040115645.1) | GCF_040115645.1-RS_2024_07 | 2024-07-03 | 2024-07-05 | FTP | B | AR | GDV |
| Chamaea fasciata (birds) | bChaFas1.0.hap1 (GCF_029207755.1) | GCF_029207755.1-RS_2024_06 | 2024-06-28 | 2024-07-01 | FTP | B | AR | GDV |
| Pocillopora verrucosa (stony corals) | ASM3666991v2 (GCF_036669915.1) | GCF_036669915.1-RS_2024_06 | 2024-06-25 | 2024-06-28 | FTP | B | AR | GDV |
| Magallana gigas (Pacific oyster) | xbMagGiga1.1 (GCF_963853765.1) | GCF_963853765.1-RS_2024_06 | 2024-06-20 | 2024-06-28 | FTP | B | AR | GDV |
| Dysidea avara (sponges) | odDysAvar1.4 (GCF_963678975.1) | GCF_963678975.1-RS_2024_06 | 2024-06-24 | 2024-06-26 | FTP | B | AR | GDV |
| Euphorbia lathyris (eudicots) | ddEupLath1.1 (GCF_963576675.1) | GCF_963576675.1-RS_2024_06 | 2024-06-06 | 2024-06-24 | FTP | B | AR | GDV |
| Labrus bergylta (ballan wrasse) | fLabBer1.1 (GCF_963930695.1) | GCF_963930695.1-RS_2024_06 | 2024-06-21 | 2024-06-24 | FTP | B | AR | GDV |
| Oscarella lobularis (sponges) | ooOscLobu1.1 (GCF_947507565.1) | GCF_947507565.1-RS_2024_06 | 2024-06-21 | 2024-06-24 | FTP | B | AR | GDV |
| Muntiacus reevesi (Reeves' muntjac) | mMunRee1.1 (GCF_963930625.1) | GCF_963930625.1-RS_2024_06 | 2024-06-21 | 2024-06-22 | FTP | B | AR | GDV |
| Phocoena phocoena (harbor porpoise) | mPhoPho1.1 (GCF_963924675.1) | GCF_963924675.1-RS_2024_06 | 2024-06-21 | 2024-06-22 | FTP | B | AR | GDV |
| Drosophila suzukii (flies) | Dsuz_RU_1.0 (GCF_037355615.1) | GCF_037355615.1-RS_2024_06 | 2024-06-14 | 2024-06-19 | FTP | B | AR | GDV |
| Hydra vulgaris (swiftwater hydra) | HydraT2T_AEP (GCF_038396675.1) | GCF_038396675.1-RS_2024_06 | 2024-06-11 | 2024-06-19 | FTP | B | AR | GDV |
| Hydra vulgaris (swiftwater hydra) | HydraT2T_105 (GCF_037890685.1) | GCF_037890685.1-RS_2024_06 | 2024-06-11 | 2024-06-19 | FTP | B | AR | GDV |
| Patagioenas fasciata (band-tailed pigeon) | bPatFas1.hap2 (GCF_036971685.1) | GCF_036971685.1-RS_2024_06 | 2024-06-14 | 2024-06-18 | FTP | B | AR | GDV |
Tables showing all genomes annotated by the NCBI Eukaryotic Genome Annotation Pipeline, with links to available resources for each, are avaliable here.