Anchored Hybrid Capture Sarcophagidae Phylogeny - SRA

SRX6048026: Anchored Hybrid Capture Sarcophagidae Phylogeny
1 ILLUMINA (Illumina HiSeq 2500) run: 1.4M spots, 171.5M bases, 75.8Mb downloads

Design: The sequences were obtained by Anchored Hybrid Enrichment, an exon capture method where fragmented genomic DNA extracts for each fly species are hybridized to a custom set of tiled oligonucleotide probes designed to match orthologous exons in the Diptera genome. Hybridized fragments are isolated by magnetic beads and a library is constructed. sequencing of pooled libraries is carried out on Illumina MySeq or HighSeq sequencers using single-read in the NCSU Genomic Sequencing Laboratory. Reads are demultiplexed, trimmed, and assembled using Trinity v.2.4 software.

Submitted by: North Carolina State University

Study: Anchored hybrid enrichment challenges the traditional classification of flesh flies (Diptera: Sarcophagidae)

PRJNA548116 • SRP201179 • All experiments • All runs

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Anchored hybrid enrichment Sarcophagidae phylogeny

Sample: r90

SAMN12002161 • SRS4950529 • All experiments • All runs

Organism: Sarcophaga aegyptica

Library:

Name: r90

Instrument: Illumina HiSeq 2500

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: SINGLE

Runs: 1 run, 1.4M spots, 171.5M bases, 75.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR9278278	1,383,122	171.5M	75.8Mb	2019-08-01

ID:: 8091201

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