Anchored Hybrid Capture Sarcophagidae Phylogeny - SRA

SRX6047989: Anchored Hybrid Capture Sarcophagidae Phylogeny
1 ILLUMINA (Illumina HiSeq 2500) run: 2.3M spots, 289.7M bases, 132.8Mb downloads

Design: The sequences were obtained by Anchored Hybrid Enrichment, an exon capture method where fragmented genomic DNA extracts for each fly species are hybridized to a custom set of tiled oligonucleotide probes designed to match orthologous exons in the Diptera genome. Hybridized fragments are isolated by magnetic beads and a library is constructed. sequencing of pooled libraries is carried out on Illumina MySeq or HighSeq sequencers using single-read in the NCSU Genomic Sequencing Laboratory. Reads are demultiplexed, trimmed, and assembled using Trinity v.2.4 software.

Submitted by: North Carolina State University

Study: Anchored hybrid enrichment challenges the traditional classification of flesh flies (Diptera: Sarcophagidae)

PRJNA548116 • SRP201179 • All experiments • All runs

show Abstracthide Abstract

Anchored hybrid enrichment Sarcophagidae phylogeny

Sample: r78

SAMN12002123 • SRS4950491 • All experiments • All runs

Organism: Brachicoma devia

Library:

Name: r78

Instrument: Illumina HiSeq 2500

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: SINGLE

Runs: 1 run, 2.3M spots, 289.7M bases, 132.8Mb

Run	# of Spots	# of Bases	Size	Published
SRR9278319	2,336,686	289.7M	132.8Mb	2019-08-01

ID:: 8091164

SRA

Sequence Read Archive

Result Filters

Send to:

Supplemental Content

Related information

Search details

Recent activity