U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX9412041: HT sequencing of synthetic AAV2: virus DNA
1 ILLUMINA (NextSeq 500) run: 805,858 spots, 241.8M bases, 98.6Mb downloads

Design: AAV variant (single mutant assay pre-design round)
Submitted by: Harvard University
Study: Deep diversification of AAV capsid proteins by machine learning
show Abstracthide Abstract
We apply deep learning to design novel adeno-associated virus (AAV) capsid proteins, a challenging target of great utility for gene therapy. Focusing on a 28-amino acid segment spanning buried and exposed regions, we generated 201,426 highly diverse variants of the AAV2 wildtype (WT) sequence, yielding 110,689 viable synthetic capsids, 57,348 of which surpass the average diversity of natural AAV serotype sequences with 12-29 mutations across this region.
Sample: Single mutant assay
SAMN16619492 • SRS7628589 • All experiments • All runs
Library:
Name: GEN00082865
Instrument: NextSeq 500
Strategy: AMPLICON
Source: SYNTHETIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 805,858 spots, 241.8M bases, 98.6Mb
Run# of Spots# of BasesSizePublished
SRR12959256805,858241.8M98.6Mb2020-11-16

ID:
12291531

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...