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ERX5120399: Illumina MiSeq paired end sequencing
1 ILLUMINA (Illumina MiSeq) run: 903,063 spots, 272.7M bases, 158.5Mb downloads

Submitted by: Gustave Roussy Institute
Study: Avadomide induces degradation of ZMYM2 fusion oncoproteins in hematologic malignancies
show Abstracthide Abstract
Thalidomide analogs exert their therapeutic effects by binding to the CRL4CRBN E3 ubiquitin ligase, promoting ubiquitination and subsequent proteasomal degradation of specific protein substrates. Drug-induced degradation of IKZF1 and IKZF3 in B-cell malignancies demonstrates the clinical utility of targeting disease-relevant transcription factors for degradation. Here, we found that avadomide (CC-122) induces CRBN-dependent ubiquitination and proteasomal degradation of ZMYM2 (ZNF198), a transcription factor involved in balanced chromosomal rearrangements with FGFR1 and FLT3 in aggressive forms of hematologic malignancies. The minimal drug-responsive element of ZMYM2 is a zinc-chelating MYM domain and is contained in the N-terminal portion of ZMYM2 that is universally included in the derived fusion proteins. We demonstrate that avadomide has the ability to induce proteasomal degradation of ZMYM2-FGFR1 and ZMYM2-FLT3 chimeric oncoproteins, both in vitro and in vivo. Our findings suggest that patients with hematologic malignancies harboring these ZMYM2 fusion proteins may benefit from avadomide treatment.
Sample: Bone marrow genomic DNA from patient 2
SAMEA8103064 • ERS5790142 • All experiments • All runs
Library:
Name: unspecified
Instrument: Illumina MiSeq
Strategy: Targeted-Capture
Source: GENOMIC
Selection: Hybrid Selection
Layout: PAIRED
Runs: 1 run, 903,063 spots, 272.7M bases, 158.5Mb
Run# of Spots# of BasesSizePublished
ERR5332015903,063272.7M158.5Mb2021-03-16

ID:
13603279

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