Agave sisalana leaf (central fraction) biological replicate 3 - SRA

Links from BioSample

SRX11450651: Agave sisalana leaf (central fraction) biological replicate 3
1 ILLUMINA (Illumina HiSeq 4000) run: 25.5M spots, 2.6G bases, 947.6Mb downloads

Design: The libraries were prepared using the KAPA Stranded mRNA-Seq kit (07962193001) for Illumina platforms following the manufacturer's protocol. Transcripts insert sizes of 150-180 bp were used. Libraries were separated into two pools and each pool was sequenced in a single lane, generating 50bp paired-end reads.

Submitted by: University of Campinas

Study: Transcriptional profiling of three abandoned Agave cultivars

PRJNA746623 • SRP328392 • All experiments • All runs

show Abstracthide Abstract

Transcriptome of A. sisalana, A. fourcroydes, and Agave hybrid 11648 ((A. amaniensis x A. angustifolia) x A. amaniensis) (H11648) growing under field conditions without irrigation for 7 years in non-calcic brown soil and semi-arid climate. For all cultivars, leaf (central fraction of the proximal-distal axis), root, and stem were sampled at noon. Leaf maturity equivalency was maintained by sampling only the fifth leaf counted from the central spike of each plant.

Sample: FTRL-12

SAMN20229227 • SRS9491077 • All experiments • All runs

Organism: Agave sisalana

Library:

Name: FTRL_12

Instrument: Illumina HiSeq 4000

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: Oligo-dT

Layout: PAIRED

Runs: 1 run, 25.5M spots, 2.6G bases, 947.6Mb

Run	# of Spots	# of Bases	Size	Published
SRR15143241	25,508,034	2.6G	947.6Mb	2021-12-07

ID:: 15315750

SRA

Sequence Read Archive

Result Filters

Send to:

Links from BioSample

Supplemental Content

Related information

Recent activity