Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

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SRX495420: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Typhimurium str. MDH-2014-0181 by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 1.1M spots, 498.9M bases, 270.5Mb downloads

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: FSIS SRCAMB

Study: GenomeTrakr Project: Minnesota Department of Health

PRJNA215333 • SRP032981 • All experiments • All runs

Sample:

SAMN02646955 • SRS577625 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Typhimurium

Library:

Name: Salmonella enterica str. MDH-2014-0181 shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Typhimurium str. MDH-2014-0181.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.18.42

Runs: 1 run, 1.1M spots, 498.9M bases, 270.5Mb

Run	# of Spots	# of Bases	Size	Published
SRR1198925	1,062,937	498.9M	270.5Mb	2014-03-18

ID:: 685517

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