Whole genome shotgun sequencing of Salmonella enterica subsp. enteric... - SRA

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SRX1453449: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Typhimurium by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 550,153 spots, 263.7M bases, 163.1Mb downloads

External Id: EXT00150301

Design: MiSeq deep shotgun sequencing of cultured isolate.

Submitted by: CFSAN

Study: GenomeTrakr Project: Minnesota Department of Health

PRJNA215333 • SRP032981 • All experiments • All runs

Sample:

SAMN02699891 • SRS1181134 • All experiments • All runs

Organism: Salmonella enterica subsp. enterica serovar Typhimurium

Library:

Name: Salmonella enterica subsp. enterica serovar Typhimurium Nextera XT shotgun

Instrument: Illumina MiSeq

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Typhimurium.

Spot descriptor:

1 forward251 reverse

Pipeline: show...hide...

Name	Step	Prev Step	Program	Version
base caller	0	NULL	RTA	1.8.5
demultiplexer	1	0	MiSeq Reporter	2.3

Runs: 1 run, 550,153 spots, 263.7M bases, 163.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR2962471	550,153	263.7M	163.1Mb	2015-11-27

ID:: 2054992

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