U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from BioSample

SRX14713665: AMPLICON of Hybrid: whole larvae
1 ILLUMINA (Illumina MiSeq) run: 41,092 spots, 7.1M bases, 3.5Mb downloads

Design: cNDA was synthesised from RNA isolated from group of 8 3rd instar larvae at 24h post wasp homogenate injections. Amplicons of 13 target genes were amplified with pre-desinged primers and pooled and indexed before submitting to sequencing.
Submitted by: University of Cambridge
Study: Gene expression rugulatory divergence between D. simulans and D. sechellia responding to parasitoid wasp infection
show Abstracthide Abstract
Infections induce a large suite of gene expression change in organisms responding to immune challenges. Despite much evidence that the sequence of proteins in the immune system can evolve very rapidly, the evolution of gene expression is comparatively poorly understood. Under constant environmental pressure, the gene regulation during immune response evolves rapidly and diverge between related species. The divergence between gene expression results from the accumulation of changes in both cis- and trans-regulatory elements between species. By sequencing the tissue-specific transcriptomes of D. simulans, D. sechellia and their F1 hybrids, we reveal the regulatory divergence between these two species in their immune response to parasitoid wasps, the contributions from cis-regulatory changes and trans-regulatory changes. The study adds to the better understanding of immune regulation evolution in Drosophila species.
Library:
Name: hyb-w-8
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: TRANSCRIPTOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 41,092 spots, 7.1M bases, 3.5Mb
Run# of Spots# of BasesSizePublished
SRR1858484841,0927.1M3.5Mb2022-04-09

ID:
21053234

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...