Metagenome sequencing of soil in Centralia site Cen21 from 2020 - SRA

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SRX20457197: Metagenome sequencing of soil in Centralia site Cen21 from 2020
1 ILLUMINA (Illumina NovaSeq 6000) run: 80.5M spots, 24.2G bases, 7.2Gb downloads

Design: Nucleic acids were coextracted using the protocol from Griffiths et al 2001. Libraries were prepared with TakaraBio ThruPLEX kit and sequenced with paired end 2X150bp sequencing. Two replicate sequencing runs (L001 and L002) were performed for each.

Submitted by: Michigan State University

Study: Metagenome sequencing data from 7 years of soil sampling at the Centralia (PA, USA) coal mine fire

PRJNA974462 • SRP438761 • All experiments • All runs

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Metagenome dataset generated to examine the recovery and resilience of bacterial community functionality within an anthropogenic disturbance gradients created by the subterranean coal mine fire in Centralia, PA, USA including 7 continuous years of sampling fire-affected, recovered, and reference sites.

Sample:

SAMN35217944 • SRS17764417 • All experiments • All runs

Organism: mine metagenome

Library:

Name: Cen21_13102020_R1_S54

Instrument: Illumina NovaSeq 6000

Strategy: WGS

Source: METAGENOMIC

Selection: RANDOM

Layout: PAIRED

Runs: 1 run, 80.5M spots, 24.2G bases, 7.2Gb

Run	# of Spots	# of Bases	Size	Published
SRR24677569	80,500,459	24.2G	7.2Gb	2024-02-21

ID:: 27880352

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