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SRX21172606: Whole-genome sequencing of bacteria from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 557,422 spots, 290.9M bases, 192.7Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN36728926 • SRS18433940 • All experiments • All runs
Organism: Citrobacter freundii
Library:
Name: BWH_259_C_fre
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 557,422 spots, 290.9M bases, 192.7Mb
Run# of Spots# of BasesSizePublished
SRR25438733557,422290.9M192.7Mb2023-07-27

ID:
28607940

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