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SRX22052465: 18S rDNA V4 sequences using HTS technology of individual LKYS01-SDC001 N. scintillans cells
1 ILLUMINA (Illumina NovaSeq 6000) run: 132,839 spots, 66.4M bases, 22.2Mb downloads

Design: Sequencing libraries were generated using NEBNext DNA Library Prep Kit. The genomic DNA was randomly fragmented to a size of 350bp by shearing; DNA fragments were end polished, A-tailed, and ligated with the NEBNext adapter for Illumina sequencing, and further PCR enriched by P5 and indexed P7 oligos. The PCR products were purified (AMPure XP system, United States), followed by analysis for size distribution. Qualified libraries were sequenced on an Illumina platform. The sequencing strategy was Novaseq PE200 (Illumina, San Diego, USA).
Submitted by: Institute of Oceanology, Chinese Academy of Sciences
Study: Metabarcoding analysis of 18S rDNA V4 sequenced obtained in single Noctiluca scintillans cells
PRJNA1026735 • SRP465534 • All experiments • All runs
show Abstracthide Abstract
To evaluate the diversity of 18S rDNA V4 in N. scintillans, distinguishing between intra-genomic molecular marker sequences variations and intra-species genetic diversity.
Sample:
SAMN37756287 • SRS19123067 • All experiments • All runs
Organism: Noctiluca scintillans
Library:
Name: LKYS01-SDC001
Instrument: Illumina NovaSeq 6000
Strategy: WGS
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 132,839 spots, 66.4M bases, 22.2Mb
Run# of Spots# of BasesSizePublished
SRR26344760132,83966.4M22.2Mb2023-10-11

ID:
29976647

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