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SRX24014200: WNV_reads_MX_Nouvelle_Aquitaine_2023
1 ION_TORRENT (Ion Torrent S5) run: 683,695 spots, 152.2M bases, 112.9Mb downloads

Design: Amplicon-tiling
Submitted by: Institut de recherche Biomedicale des Armees
Study: MX_Nouvelle_Aquitaine_2023 Targeted loci environmental
PRJNA1085973 • SRP494432 • All experiments • All runs
show Abstracthide Abstract
COI amplicon sequencing of trapped mosquito excreta using vertebrate specific (degenerated) primers: 5'-CGMATRAAYAAYATRAGCTTCTGAY -3' and 5'-TTCDGGRTGNCCRAARAATCA-3'
Sample:
SAMN40566709 • SRS20809328 • All experiments • All runs
Organism: West Nile virus
Library:
Name: E2-M2
Instrument: Ion Torrent S5
Strategy: AMPLICON
Source: VIRAL RNA
Selection: PCR
Layout: SINGLE
Runs: 1 run, 683,695 spots, 152.2M bases, 112.9Mb
Run# of Spots# of BasesSizePublished
SRR28409750683,695152.2M112.9Mb2024-03-21

ID:
32320256

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