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SRX24223608: Whole-genome sequencing of pathogens from a hospital setting
1 ILLUMINA (Illumina MiSeq) run: 1.2M spots, 595.7M bases, 330.4Mb downloads

Design: Illumina library prep using Nextera DNA UD indices
Submitted by: Brigham and Women's Hospital
Study: Antimicrobial Surveillance from Brigham & Women's Hospital, Boston MA
PRJNA278886 • SRP056445 • All experiments • All runs
show Abstracthide Abstract
The goal of this project is to identify carbapenemases and other beta-lactamases in clinical isolates with WGS and assess their mobilization potential . The results can support national surveillance of clinically identified pathogens and provide invaluable information to infection control in hospital.
Sample:
SAMN40930670 • SRS20993240 • All experiments • All runs
Organism: Escherichia coli
Library:
Name: BWH_1868_E_col
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Runs: 1 run, 1.2M spots, 595.7M bases, 330.4Mb
Run# of Spots# of BasesSizePublished
SRR286256381,162,145595.7M330.4Mb2024-04-11

ID:
32535629

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