Acanthogobius hasta target enrichment sequences from caudal fin tissue - SRA

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SRX24246374: Acanthogobius hasta target enrichment sequences from caudal fin tissue
1 ILLUMINA (Illumina HiSeq 2500) run: 223,558 spots, 44.2M bases, 32.4Mb downloads

Design: Targeted sequences of Acanthogobius hasta were enriched from fin clip tissue. We sheared the 1000 ng purified DNA into around 250 bp using a Covaris M220 Focused-ultrasonicator (Woburn, Massachusetts, U.S.A.). Sheared DNA was used to prepare libraries with two different indexes incorporated in both ends. All indexed libraries were mixed into one tube equimolarity for gene enrichment and Illumina sequencing on a HiSeq 2500 sequencer (Illumina, Inc, San Diego, CA, U.S.A.).

Submitted by: Shanghai Ocean University

Study: Estimation of Species Abundance Based on the Number of Segregating Sites using Environmental DNA (eDNA)

PRJNA1100443 • SRP501708 • All experiments • All runs

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This study explored the potential of using the number of segregation sites extracted from environmental DNA (eDNA) samples as an unbiased proxy to estimate species abundance.

Sample:

SAMN40968890 • SRS21014090 • All experiments • All runs

Organism: Acanthogobius hasta

Library:

Name: CL1176_91

Instrument: Illumina HiSeq 2500

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 223,558 spots, 44.2M bases, 32.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR28678353	223,558	44.2M	32.4Mb	2024-04-15

ID:: 32558828

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