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SRX24629579: 495 amplicons for 415 targets across all 14 P. vivax chromosomes
1 ILLUMINA (Illumina MiSeq) run: 33,809 spots, 15.6M bases, 7.6Mb downloads

Design: Illumina Ampliseq
Submitted by: Center for Disease Control and Prevention
Study: Plasmodium vivax AmpliSeq Assay
PRJNA1092573 • SRP509025 • All experiments • All runs
show Abstracthide Abstract
The Centers for Disease Control and Prevention (CDC) developed a highly-multiplex genotyping based AmpliSeq assay to monitor the surveillance of imported Plasmodium vivax (Pv) cases in the United States from Pv endemic regions. The goal of this project is to 1) report the drug resistance mutations for the P.vivax molecular resistance markers, 2) Predict the geographic origin of the P.vivax infected samples and 3) Genetic clustering to identify the closely related P.vivax strains.
Sample: Highly-multiplexed AmpliSeq assay for P. vivax surveillance
SAMN41477443 • SRS21366672 • All experiments • All runs
Organism: Plasmodium vivax
Library:
Name: WA0001-13-1PvT
Instrument: Illumina MiSeq
Strategy: AMPLICON
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 33,809 spots, 15.6M bases, 7.6Mb
Run# of Spots# of BasesSizePublished
SRR2910590233,80915.6M7.6Mb2024-05-21

ID:
32948459

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