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SRX2629954: Whole genome shotgun sequencing of Salmonella enterica subsp. enterica serovar Newport by Illumina MiSeq
1 ILLUMINA (Illumina MiSeq) run: 244,723 spots, 120.4M bases, 81.5Mb downloads

External Id: EXT00248089
Design: MiSeq deep shotgun sequencing of cultured isolate.
Submitted by: FDA Center for Food Safety and Applied Nutrition (CFSAN)
Study: GenomeTrakr Project: Environmental Salmonella isolates, Emory University - FDA-CFSAN
PRJNA308180 • SRP095355 • All experiments • All runs
show Abstracthide Abstract
Whole genome sequencing of environmental Salmonella isolates - Emory University - FDA-CFSAN
Sample:
SAMN05195915 • SRS2039779 • All experiments • All runs
Organism: Salmonella enterica subsp. enterica serovar Newport
Library:
Name: Salmonella enterica subsp. enterica serovar Newport Nextera XT shotgun
Instrument: Illumina MiSeq
Strategy: WGS
Source: GENOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: Illumina Nextera XT library created for Salmonella enterica subsp. enterica serovar Newport.
Spot descriptor:
1  forward251  reverse

Pipeline: show...hide...
NameStepPrev StepProgramVersion
base caller0NULLRTA1.8.5
demultiplexer10MiSeq Reporter2.3
Runs: 1 run, 244,723 spots, 120.4M bases, 81.5Mb
Run# of Spots# of BasesSizePublished
SRR5330959244,723120.4M81.5Mb2017-03-09

ID:
3807529

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