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SRX2338779: Lymphocytic choriomeningitis culture #1424
1 ILLUMINA (Illumina MiSeq) run: 748,961 spots, 153.8M bases, 74.8Mb downloads

Design: RNA extracted using QIAamp viral RNA minikit (Qiagen) followed by Turbo DNase I (Thermo Fisher Scientific) and purification using the RNA Clean & Concentrator kit (Zymo). cDNA produced using Ovation RNA-seq version 2 system (NuGen). Illumina Nextera XT protocol used to produce library.
Submitted by: Public Health England
Study: National Collection of Pathogenic Viruses cell culture sequencing
PRJNA352774 • SRP093070 • All experiments • All runs
show Abstracthide Abstract
We aimed to metagenomically sequence viral culture samples from the National Collection of Pathogenic Viruses, to identify/confirm the pathogenic species/strain(s) present.
Sample:
SAMN05992331 • SRS1791656 • All experiments • All runs
Organism: Mammarenavirus choriomeningitidis
Library:
Name: NCPV_B2_LCMV_1424
Instrument: Illumina MiSeq
Strategy: WGS
Source: VIRAL RNA
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 748,961 spots, 153.8M bases, 74.8Mb
Run# of Spots# of BasesSizePublished
SRR5007125748,961153.8M74.8Mb2016-11-14

ID:
3412801

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