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ERX2582195: NextSeq 500 paired end sequencing
1 ILLUMINA (NextSeq 500) run: 64.1M spots, 9.7G bases, 3.6Gb downloads

Design: RNA expression profiling
Submitted by: Koala genome consortium
Study: Bacterial and host drivers of chlamydial blindness in koalas
show Abstracthide Abstract
Chlamydial infection of the eyes is a significant cause of disease and death in koalas, contributing to the ongoing decline of this native species. Little is known about what influences the outcome of these infections, challenging efforts to manage and control koala chlamydial blindness. This project aims to evaluate whether differences in the infecting Chlamydia pecorum strains or the koala immune response, are associated with the outcome of chlamydial ocular infection. In addition to helping us to understand and prevent blindness in koalas, this project will significantly expand our knowledge of the koala immune system and generate an array of koala immunological assays, outcomes that will benefit all koala conservation efforts
Sample: Ocular sample from 60251 'Matt', recorded by veterinarians as diseased
SAMEA4646058 • ERS2466703 • All experiments • All runs
Library:
Name: 60251E
Instrument: NextSeq 500
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: RANDOM
Layout: PAIRED
Construction protocol: TruSeq Stranded Total RNA Ribo-Zero H/M/R Gold
Runs: 1 run, 64.1M spots, 9.7G bases, 3.6Gb
Run# of Spots# of BasesSizePublished
ERR256385164,148,0379.7G3.6Gb2018-07-03

ID:
5849054

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