U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX1436671: RNAseq from sample Anabaena (Nostoc ) sp. PCC 7120 coaR-PcoaT::furA fusion strain
1 ILLUMINA (Illumina MiSeq) run: 2.1M spots, 635.1M bases, 278.7Mb downloads

Submitted by: University of Zaragoza
Study: Comparative transcriptome of Anabaena (Nostoc) sp. PCC 7120 versus a conditional lethal mutant with silenced furA
show Abstracthide Abstract
The goal of this study is to unveil novel targets of the global regulator FurA using a conditional lethal mutant of Nostoc (Anabaena) sp. PCC 7120. Complete segregation of the inactivated furA gene has not been possible to date. Therefore, comparative transcriptomics of the AGcoaRFurA strain, where furA expression can be silenced and further validation with RT-PCR and EMSA assays of a set of selected genes led to identify novel FurA direct targets involved in different physiological processes.
Sample: Anabaena (Nostoc) sp. PCC 7120 coaR-PcoaT::furA fusion strain
SAMN04253749 • SRS1167442 • All experiments • All runs
Library:
Instrument: Illumina MiSeq
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: unspecified
Layout: PAIRED
Spot descriptor:
forward151  reverse

Pipeline: show...hide...
Program
CLC Genomics Workbench
Runs: 1 run, 2.1M spots, 635.1M bases, 278.7Mb
Run# of Spots# of BasesSizePublished
SRR29233282,117,001635.1M278.7Mb2015-11-27

ID:
2032007

Supplemental Content

Search details

See more...

Recent activity