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SRX8580507: Deep sequencing detects Human Papillomavirus (HPV) in cervical cancers negative for HPV by PCR
1 ILLUMINA (Illumina NovaSeq 6000) run: 3M spots, 487.9M bases, 182Mb downloads

Design: blastx of human filtered reads to PaVe HPV protein database
Submitted by: Karolinska Institute
Study: RNA sequencing of HPV-negative invasive cervical cancers
PRJNA563802 • SRP220229 • All experiments • All runs
show Abstracthide Abstract
RNAseq on DNA extracted material for detecting human papillomaviruses in "apparently HPV-negative" cervical cancers
Sample:
SAMN15323191 • SRS6872324 • All experiments • All runs
Organism: Human papillomavirus
Library:
Name: 2020_C4_1067
Instrument: Illumina NovaSeq 6000
Strategy: RNA-Seq
Source: GENOMIC
Selection: cDNA
Layout: PAIRED
Runs: 1 run, 3M spots, 487.9M bases, 182Mb
Run# of Spots# of BasesSizePublished
SRR120521392,986,281487.9M182Mb2020-06-19

ID:
11155926

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