GBMF Marine Phage Sequencing Project - SRA

SRX042423: GBMF Marine Phage Sequencing Project
1 LS454 (454 GS FLX Titanium) run: 3,214 spots, 1.7M bases, 3.9Mb downloads

UUID: 6a0ea47f-0a8a-4874-8ff7-49916c00fc3a

Design: International collaboration to sequence, assemble, and annotate approximately 200 diverse marine phage/virus genomes and to sequence approximately 50 viral metagenomes from an array of marine environments. DNA sequencing using 454 technology.

Submitted by: Broad Institute (BI)

Study: Paenibacillus phage PG1 genome sequencing project

PRJNA47551 • SRP005719 • All experiments • All runs

Sample: Generic sample from Paenibacillus phage PG1

SAMN00215854 • SRS172785 • All experiments • All runs

Organism: Paenibacillus phage PG1

Library:

Name: 454-3414

Instrument: 454 GS FLX Titanium

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Spot descriptor:

barcode

Group tag	Basecalls
	AGACAC

11 forward

Experiment attributes: (show all 6 attributes...) (hide...)

analysis_type: DNA Viral 454 Alignment and Assembly

gssr_id: 39858.1

lsid: BROAD:SEQUENCING_SAMPLE:39858.1

material_type: Genomic DNA

project: G2358

work_request: 20027

Pipeline: show...hide...

Name	Step	Program	Version
base caller	2009-10-21 02:04:31.0	454BaseCaller	2.0.01.12

Runs: 1 run, 3,214 spots, 1.7M bases, 3.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR100641	3,214	1.7M	3.9Mb	2011-06-30

ID:: 50695

SRA

Sequence Read Archive

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