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8Z9R:
Cryo-EM structure of Thogoto virus polymerase in a replication elongation-reception conformation
PDB ID:
8Z9R
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MMDB ID:
247740
PDB Deposition Date:
2024/4/23
Updated in MMDB:
2024/06
Experimental Method:
electron microscopy
Resolution:
2.58 Å
Source Organism:
Thogoto virus (isolate SiAr 126)
Similar Structures:
VAST+
Download sequence data
Molecular Components in 8Z9R
Label
Count
Molecule
Proteins (6 molecules)
A
H
2
Polymerase Acidic Protein
B
I
2
RNA-directed RNA Polymerase Catalytic Subunit
C
J
2
Polymerase Basic Protein 2
Nucleotides(5 molecules)
D
1
RNA (5'-r(*ap*gp*ap*gp*ap*ap*ap*up*cp*ap*ap*gp*gp*cp*ap*gp*up*u)-3')
E
F
2
RNA (5'-r(*gp*ap*cp*up*gp*cp*cp*up*gp*up*up*up*up*up*gp*cp*u)-3')
G
K
2
RNA (5'-d(*(atp))-r(p*gp*cp*ap*ap*ap*ap*ap*cp*a)-3')
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303