1PPJ: Bovine cytochrome bc1 complex with stigmatellin and antimycin

PDB ID: 1PPJDownload
MMDB ID: 28489
PDB Deposition Date: 2003/6/16
Updated in MMDB: 2012/12
Experimental Method:
x-ray diffraction
Resolution: 2.1  Å
Source Organism:
Similar Structures:
Biological Unit for 1PPJ: eicosameric; determined by author and by software (PISA)
Molecular Components in 1PPJ
Label Count Molecule
Proteins (20 molecules)
2
Ubiquinol-cytochrome C Reductase Complex Core Protein I, Mitochondrial
(Gene symbol: UQCRC1)
Molecule annotation
2
Ubiquinol-cytochrome C Reductase Complex Core Protein 2, Mitochondrial
(Gene symbol: UQCRC2)
Molecule annotation
2
Cytochrome B
(Gene symbol: CYTB)
Molecule annotation
2
Cytochrome C1, Heme Protein, Mitochondrial
(Gene symbol: CYC1)
Molecule annotation
2
Ubiquinol-cytochrome C Reductase Iron-sulfur Subunit, Mitochondrial
(Gene symbol: UQCRFS1)
Molecule annotation
2
Ubiquinol-cytochrome C Reductase Complex 14 KDA Protein
(Gene symbol: UQCRB)
Molecule annotation
2
Ubiquinol-cytochrome C Reductase Complex Ubiquinone-binding Protein Qp-c
(Gene symbol: UQCRQ)
Molecule annotation
2
Ubiquinol-cytochrome C Reductase Complex 11 KDA Protein
(Gene symbol: UQCRH)
Molecule annotation
2
Ubiquinol-cytochrome C Reductase Iron-sulfur Subunit, Mitochondrial
(Gene symbol: UQCRFS1)
Molecule annotation
2
Ubiquinol-cytochrome C Reductase Complex 7.2 KDA Protein
(Gene symbol: UQCR10)
Molecule annotation
Chemicals and Non-standard biopolymers (45 molecules)
1
9
hexyl beta-D-glucopyranosidehexyl beta-D-glucopyranoside
2
5
PHOSPHATE IONPHOSPHATE ION
3
5
AZIDE IONAZIDE ION
4
6
GLYCEROLGLYCEROL
5
4
PROTOPORPHYRIN IX CONTAINING FEPROTOPORPHYRIN IX CONTAINING FE
6
2
STIGMATELLIN ASTIGMATELLIN A
7
4
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine1,2-dioleoyl-sn-glycero-3-phosphoethanolamine
8
2
2-METHYL-BUTYRIC ACID 3-(3-FORMYLAMINO-2-HYDROXY-BENZOYLAMINO)-8-HEPTYL-2,6-DIMETHYL-4,9-DIOXO-[1,5]DIOXONAN-7-YL ESTER2-METHYL-BUTYRIC ACID 3-(3-FORMYLAMINO-2-HYDROXY-BENZOYLAMINO)-8-HEPTYL-2,6-DIMETHYL-4,9-DIOXO-[1,5]DIOXONAN-7-YL ESTER
9
2
HEME CHEME C
10
4
CARDIOLIPINCARDIOLIPIN
11
2
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303