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5OMX:
X-ray Structure of the H2A-N38C Nucleosome Core Particle
PDB ID:
5OMX
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MMDB ID:
156023
PDB Deposition Date:
2017/8/2
Updated in MMDB:
2017/11
Experimental Method:
x-ray diffraction
Resolution:
2.32 Å
Source Organism:
Homo sapiens
▼
Taxonomy
Molecule
Homo sapiens
I, J
Xenopus laevis
A, B, C, D, E, F, G, H
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5OMX: decameric; determined by author and by software (PISA)
Molecular Components in 5OMX
Label
Count
Molecule
Proteins (8 molecules)
A
E
2
Histone H3.2
B
F
2
Histone H4
C
G
2
Histone H2A
D
H
2
Histone H2B 1.1
Nucleotides(2 molecules)
I
1
DNA (147-mer)
J
1
DNA (147-mer)
Chemicals and Non-standard biopolymers (37 molecules)
1
33
MANGANESE (II) ION
2
4
CHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303