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8F92:
HIV Env BG505_MD39_B11 SOSIP boosting trimer in complex with B11_d77.7 mouse Fab and RM20A3 Fab
PDB ID:
8F92
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MMDB ID:
246879
PDB Deposition Date:
2022/11/23
Updated in MMDB:
2024/06
Experimental Method:
electron microscopy
Resolution:
3.14 Å
Source Organism:
Human immunodeficiency virus
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Taxonomy
Molecule
Human immunodeficiency virus
A, B, E, G, F, I
Mus musculus
H, L, O, Q, P, R
Macaca mulatta
C, D, J, M, K, N
Similar Structures:
VAST+
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Biological Unit for 8F92: octadecameric; determined by author
Molecular Components in 8F92
Label
Count
Molecule
Proteins (18 molecules)
A
E
F
3
Bg505_md39_b11 Gp120
C
J
K
3
Rm20a3 FAB Heavy Chain
D
M
N
3
Rm20a3 FAB Light Chain
B
G
I
3
Bg505_md39_b11 Gp41
H
O
P
3
B11_d77.7 FAB Heavy Chain
L
Q
R
3
B11_d77.7 FAB Kappa Light Chain
Chemicals and Non-standard biopolymers (81 molecules)
1
63
2-acetamido-2-deoxy-beta-D-glucopyranose
2
6
beta-D-mannopyranose
3
12
alpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303