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Genome Information for Trogon surrucura
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The surucua trogon (Ciconia maguari) is a colorful trogon species found in humid forest of southeast South America. Trogon in Greek means "nibbling" and refers to the fact that these birds gnaw holes in trees to make their nests (from Wikipedia entry). This sample is from a female collected by D. A. Banin in 1995, stored by the Smithsonian Institute. It was further procured by Gary Graves of the Smithsonian Museum in Washington D.C., to generate a high-quality reference for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, lead by Olivier Fedrigo and Erich D. Jarvis, with support from Tom Gilbert and Jarvis.
| Accession | PRJNA776873 |
| Type | Umbrella project |
| Organism | Trogon surrucura[Taxonomy ID: 297711] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Coraciimorphae; Trogoniformes; Trogonidae; Trogon; Trogon surrucura |
| Submission | Registration date: 1-Nov-2021
Vertebrate Genomes Project |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 45 |
| WGS master | 2 |
| SRA Experiments | 3 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds SRA or Trace Total |
1
1
1
3
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA774295 | Chromosomes | Trogon surrucura | Trogon surrucura (Surucua trogon) genome, bTroSur1, primary haplotype (Vertebrate Genomes Project) | | PRJNA774296 | Scaffolds | Trogon surrucura | Trogon surrucura (Surucua trogon) genome, bTroSur1, alternate haplotype (Vertebrate Genomes Project) | | PRJNA1005980 | SRA or Trace | Trogon surrucura (Surucua trogon) genome, bTroSur1, sequence data. | Trogon surrucura (Surucua trogon) genome, bTroSur1, sequence data. (G10K) |
|