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Accession: PRJEB50706 ID: 961548

Saccharomyces cerevisiae reference assembly panel (ScRAP). Raw sequencing data

Nanopore and illumina read sequencing of a diverse set of Saccharomyces cerevisiae strains for de-novo assemblies. Raw sequencing data

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This project is a component of the Saccharomyces cerevisiae reference assembly panel (ScRAP)
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4 additional projects are components of the Saccharomyces cerevisiae reference assembly panel (ScRAP).
A diverse set of Saccharomyces cerevisiae strains were selected based on unique features such as phylogenetic position, heterozygosity, ploidy etc and sequenced both with Nanopore and Illumina technology in order to generate accurate de-novo assemblies for each strain. Raw sequencing data
AccessionPRJEB50706
Data TypeGenome sequencing and assembly
ScopeMonoisolate
SubmissionRegistration date: 25-Apr-2023
ibps sorbonne universite
Locus Tag PrefixLOCUSTAG
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)5228
WGS master117
Genomic DNA114
SRA Experiments288
Protein Sequences792451
Other datasets
BioSample118
Assembly117
Assembly details:
Assembly levelNumber of Assemblies
Scaffold Scaffold
Contig Contig
Total
33
84
117
AssemblyLevelWGSBioSampleTaxonomy
GCA_029991455.1ScaffoldCANCMI000000000SAMEA112135659
Saccharomyces cerevisiae
GCA_029991875.1ContigCANCFP000000000SAMEA112135653
Saccharomyces cerevisiae
GCA_029991855.1ContigCANCBQ000000000SAMEA12946427
Saccharomyces cerevisiae
GCA_029991815.1ContigCANCUU000000000SAMEA12946360
Saccharomyces cerevisiae
GCA_947370435.1ContigCANCDV000000000SAMEA12946403
Saccharomyces cerevisiae
GCA_029991395.1ScaffoldCANBOI000000000SAMEA12946421
Saccharomyces cerevisiae
GCA_029991355.1ContigCANBXV000000000SAMEA12946444
Saccharomyces cerevisiae
GCA_029991515.1ContigCANCVL000000000SAMEA12946449
Saccharomyces cerevisiae
GCA_029991315.1ScaffoldCANBOP000000000SAMEA12946406
Saccharomyces cerevisiae
GCA_029991755.1ContigCANBSO000000000SAMEA12946431
Saccharomyces cerevisiae
GCA_029991655.1ContigCANBON000000000SAMEA12946398
Saccharomyces cerevisiae
GCA_029991625.1ContigCANBPV000000000SAMEA12946371
Saccharomyces cerevisiae
GCA_029991605.1ContigCANBYB000000000SAMEA12946396
Saccharomyces cerevisiae
GCA_947370255.1ContigCANBSB000000000SAMEA12946397
Saccharomyces cerevisiae
GCA_947370245.1ContigCANCFQ000000000SAMEA12946359
Saccharomyces cerevisiae
GCA_029990535.1ContigCANCPB000000000SAMEA12946387
Saccharomyces cerevisiae
GCA_947370275.1ContigCANBNQ000000000SAMEA12946407
Saccharomyces cerevisiae
GCA_029990435.1ContigCANCON000000000SAMEA12946428
Saccharomyces cerevisiae
GCA_029990515.1ContigCANBWI000000000SAMEA112135649
Saccharomyces cerevisiae
GCA_947370215.1ScaffoldCANCGT000000000SAMEA12946410
Saccharomyces cerevisiae
GCA_029990475.1ContigCANBMR000000000SAMEA112135663
Saccharomyces cerevisiae
GCA_947370885.1ContigCANCVU000000000SAMEA12946418
Saccharomyces cerevisiae
GCA_947370465.1ScaffoldCANBYC000000000SAMEA112135657
Saccharomyces cerevisiae
GCA_947369975.1ContigCANCFR000000000SAMEA12946381
Saccharomyces cerevisiae
GCA_947370715.1ContigCANBXQ000000000SAMEA112135669
Saccharomyces cerevisiae
GCA_029990335.1ContigCANCJW000000000SAMEA12946366
Saccharomyces cerevisiae
GCA_029990315.1ContigCANCRS000000000SAMEA12946425
Saccharomyces cerevisiae
GCA_029990395.1ContigCANBMU000000000SAMEA12946433
Saccharomyces cerevisiae
GCA_947370585.1ScaffoldCANCVI000000000SAMEA12946422
Saccharomyces cerevisiae
GCA_029990685.1ContigCANBSK000000000SAMEA12946372
Saccharomyces cerevisiae
GCA_029990665.1ContigCANCFS000000000SAMEA12946380
Saccharomyces cerevisiae
GCA_029990645.1ScaffoldCANCVO000000000SAMEA112135652
Saccharomyces cerevisiae
GCA_029990965.1ContigCANBTV000000000SAMEA12946358
Saccharomyces cerevisiae
GCA_029991075.1ContigCANBOS000000000SAMEA12946415
Saccharomyces cerevisiae
GCA_029991145.1ContigCANCGP000000000SAMEA12946405
Saccharomyces cerevisiae
GCA_029990945.1ContigCANCSZ000000000SAMEA12946363
Saccharomyces cerevisiae
GCA_029990925.1ScaffoldCANCLA000000000SAMEA12946409
Saccharomyces cerevisiae
GCA_029990905.1ContigCANBTS000000000SAMEA12946414
Saccharomyces cerevisiae
GCA_029990885.1ContigCANBOU000000000SAMEA12946440
Saccharomyces cerevisiae
GCA_029990865.1ContigCANCLM000000000SAMEA112135670
Saccharomyces cerevisiae
GCA_029990845.1ContigCANBMW000000000SAMEA12946443
Saccharomyces cerevisiae
GCA_029990825.1ContigCANCFB000000000SAMEA12946368
Saccharomyces cerevisiae
GCA_029990805.1ContigCANCNU000000000SAMEA12946376
Saccharomyces cerevisiae
GCA_947369765.1ScaffoldCANBWE000000000SAMEA112135661
Saccharomyces cerevisiae
GCA_029990785.1ScaffoldCANCOQ000000000SAMEA12946447
Saccharomyces cerevisiae
GCA_947370535.1ContigCANCSG000000000SAMEA12946426
Saccharomyces cerevisiae
GCA_947370785.1ContigCANBNL000000000SAMEA12946378
Saccharomyces cerevisiae
GCA_947370305.1ContigCANCNK000000000SAMEA112135667
Saccharomyces cerevisiae
GCA_029990765.1ContigCANCVP000000000SAMEA12946436
Saccharomyces cerevisiae
GCA_947369785.1ContigCANBPN000000000SAMEA12946382
Saccharomyces cerevisiae
GCA_029990745.1ContigCANCHI000000000SAMEA12946424
Saccharomyces cerevisiae
GCA_029990725.1ScaffoldCANBNT000000000SAMEA12946442
Saccharomyces cerevisiae
GCA_947369885.1ScaffoldCANBNM000000000SAMEA12946445
Saccharomyces cerevisiae
GCA_947370445.1ContigCANCKW000000000SAMEA12946390
Saccharomyces cerevisiae
GCA_947369935.1ScaffoldCANCJB000000000SAMEA12946374
Saccharomyces cerevisiae
GCA_029990705.1ScaffoldCANCIE000000000SAMEA12946400
Saccharomyces cerevisiae
GCA_029991225.1ContigCANBQB000000000SAMEA12946417
Saccharomyces cerevisiae
GCA_947370505.1ContigCANCCZ000000000SAMEA12946429
Saccharomyces cerevisiae
GCA_029989845.1ContigCANCBM000000000SAMEA12946423
Saccharomyces cerevisiae
GCA_947370175.1ContigCANBMY000000000SAMEA12946392
Saccharomyces cerevisiae
GCA_947370195.1ScaffoldCANBVP000000000SAMEA112135658
Saccharomyces cerevisiae
GCA_947370145.1ContigCANCLC000000000SAMEA12946367
Saccharomyces cerevisiae
GCA_947369955.1ContigCANBMV000000000SAMEA12946416
Saccharomyces cerevisiae
GCA_947370705.1ScaffoldCANCRN000000000SAMEA112135655
Saccharomyces cerevisiae
GCA_947369795.1ContigCANCFJ000000000SAMEA112135668
Saccharomyces cerevisiae
GCA_029989085.1ContigCANBNW000000000SAMEA12946383
Saccharomyces cerevisiae
GCA_029990125.1ContigCANCIU000000000SAMEA12946361
Saccharomyces cerevisiae
GCA_947370805.1ContigCANBSG000000000SAMEA12946408
Saccharomyces cerevisiae
GCA_029989385.1ScaffoldCANCUJ000000000SAMEA12946430
Saccharomyces cerevisiae
GCA_029989255.1ContigCANBMS000000000SAMEA112135660
Saccharomyces cerevisiae
GCA_947370825.1ScaffoldCANBOT000000000SAMEA112135651
Saccharomyces cerevisiae
GCA_947370365.1ScaffoldCANCFO000000000SAMEA12946402
Saccharomyces cerevisiae
GCA_947370325.1ContigCANCKA000000000SAMEA12946448
Saccharomyces cerevisiae
GCA_947370645.1ContigCANCVF000000000SAMEA12946377
Saccharomyces cerevisiae
GCA_947370875.1ContigCANCVT000000000SAMEA12946370
Saccharomyces cerevisiae
GCA_947370665.1ContigCANCVN000000000SAMEA12946362
Saccharomyces cerevisiae
GCA_947369865.1ContigCANCBN000000000SAMEA12946401
Saccharomyces cerevisiae
GCA_947370185.1ContigCANBMQ000000000SAMEA12946369
Saccharomyces cerevisiae
GCA_947370025.1ContigCANCBT000000000SAMEA12946413
Saccharomyces cerevisiae
GCA_947370495.1ScaffoldCANCVG000000000SAMEA12946386
Saccharomyces cerevisiae
GCA_947370345.1ContigCANCCP000000000SAMEA12946389
Saccharomyces cerevisiae
GCA_947369855.1ContigCANBMT000000000SAMEA12946399
Saccharomyces cerevisiae
GCA_030036475.2ContigCANCTG000000000SAMEA12946450
Saccharomyces cerevisiae
GCA_030036455.2ContigCANCMJ000000000SAMEA12946446
Saccharomyces cerevisiae
GCA_030036355.2ContigCANCGW000000000SAMEA12946435
Saccharomyces cerevisiae
GCA_030036335.2ContigCANBQZ000000000SAMEA12946434
Saccharomyces cerevisiae
GCA_030036315.2ContigCANCTQ000000000SAMEA12946432
Saccharomyces cerevisiae
GCA_030036295.2ContigCANCFL000000000SAMEA12946420
Saccharomyces cerevisiae
GCA_030036235.2ContigCANCNF000000000SAMEA12946411
Saccharomyces cerevisiae
GCA_030036215.2ContigCANCML000000000SAMEA12946404
Saccharomyces cerevisiae
GCA_030036175.2ContigCANCFN000000000SAMEA12946394
Saccharomyces cerevisiae
GCA_030036155.2ContigCANBZZ000000000SAMEA12946393
Saccharomyces cerevisiae
GCA_030036135.2ContigCANBQV000000000SAMEA12946391
Saccharomyces cerevisiae
GCA_030036115.2ContigCANCMT000000000SAMEA12946385
Saccharomyces cerevisiae
GCA_030036095.2ContigCANCTU000000000SAMEA12946384
Saccharomyces cerevisiae
GCA_030036495.1ContigCANCVH000000000SAMEA13011150
Saccharomyces cerevisiae
GCA_030036435.1ContigCANCIQ000000000SAMEA12946441
Saccharomyces cerevisiae
GCA_030036415.1ScaffoldCANCVS000000000SAMEA12946439
Saccharomyces cerevisiae
GCA_030036395.1ContigCANCVQ000000000SAMEA12946438
Saccharomyces cerevisiae
GCA_030036375.1ScaffoldCANCAJ000000000SAMEA12946437
Saccharomyces cerevisiae
GCA_030036275.1ContigCANCQR000000000SAMEA12946419
Saccharomyces cerevisiae
GCA_030036255.1ContigCANCHW000000000SAMEA12946412
Saccharomyces cerevisiae
GCA_030036195.1ContigCANBYQ000000000SAMEA12946395
Saccharomyces cerevisiae
GCA_030036075.1ScaffoldCANCPS000000000SAMEA12946379
Saccharomyces cerevisiae
GCA_030036055.1ContigCANCFK000000000SAMEA12946375
Saccharomyces cerevisiae
GCA_030036035.1ScaffoldCANCSJ000000000SAMEA12946373
Saccharomyces cerevisiae
GCA_030036015.1ContigCANCVR000000000SAMEA12946365
Saccharomyces cerevisiae
GCA_030035995.1ContigCANCFM000000000SAMEA12946364
Saccharomyces cerevisiae
GCA_030035975.1ScaffoldCANBMX000000000SAMEA12946357
Saccharomyces cerevisiae
GCA_030035955.1ScaffoldCANCFI000000000SAMEA112135666
Saccharomyces cerevisiae
GCA_030035935.1ScaffoldCANCUT000000000SAMEA112135665
Saccharomyces cerevisiae
GCA_030035915.1ScaffoldCANCQQ000000000SAMEA112135664
Saccharomyces cerevisiae
GCA_030035895.1ScaffoldCANCVM000000000SAMEA112135662
Saccharomyces cerevisiae
GCA_030035875.1ScaffoldCANCQO000000000SAMEA112135656
Saccharomyces cerevisiae
GCA_030035855.1ScaffoldCANCFH000000000SAMEA112135654
Saccharomyces cerevisiae
GCA_030035835.1ScaffoldCANCMO000000000SAMEA112135650
Saccharomyces cerevisiae
GCA_947370695.2ScaffoldCANCMK000000000SAMEA12946388
Saccharomyces cerevisiae
SRA Data Details
ParameterValue
Data volume, Gbases339
Data volume, Tbytes0.25

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