Molecular Pathogenesis
RET encodes a receptor tyrosine kinase with extracellular, transmembrane, and intracellular domains. The extracellular domain consists of a calcium-binding cadherin-like domain and a cysteine-rich domain. The encoded protein plays a role in signal transduction by interaction with the glial-derived neurotropic factor (GDNF) family of ligands: GDNF, neurturin, persephin, and artemin. Ligand interaction is via the ligand-binding GDNF family receptors (GFRα) to which RET protein binds the encoded protein complexes. Formation of a complex containing two RET protein molecules leads to RET autophosphorylation, RET kinase activation, and intracellular signaling whereby phosphorylated tyrosines become docking sites for intracellular signaling proteins [Salvatore et al 2021]. The RET tyrosine kinase catalytic core, which is located in the intracellular domain, causes downstream activation of the mitogen-activated protein (MAP) kinase signaling cascade [Salvatore et al 2021]. Pathogenic variants causing multiple endocrine neoplasia type 2 (MEN2) lead to constitutive activation (i.e., gain of function) of tyrosine kinase.
The most common pathogenic variants are non-conservative substitutions located in one of six cysteine codons in the extracellular domain of the encoded protein. They include codons 609, 611, 618, and 620 in exon 10 and codons 630 and 634 in exon 11 [Takahashi et al 1998, Wells et al 2015, Romei et al 2016, Elisei et al 2019]. All of these variants have been identified in families with MEN2A and some have been identified in families with familial medullary thyroid carcinoma (FMTC). Pathogenic variants in these sites have been detected in 98% of families with MEN2A [Eng et al 1996].
The risk for aggressive medullary thyroid carcinoma (MTC), pheochromocytoma, and hyperparathyroidism can be estimated based on genotype (see Table 3 and Table 6).
Approximately 95% of all individuals with the MEN2B phenotype have a pathogenic variant in the tyrosine kinase domain of RET at codon 918 in exon 16, which substitutes a threonine for methionine [Eng et al 1996, Wells et al 2015]. A second pathogenic variant, p.Ala883Phe, resulting from a two-nucleotide indel, has been found in 2%-3% of individuals with MEN2B [Wells et al 2015, Salvatore et al 2021].
Two variants in cis configuration on one RET allele have been reported in individuals with MEN2B (see Table 9 for codon 804 in combination with 778, 805, 806, and 904) [Miyauchi et al 1999, Menko et al 2002, Cranston et al 2006, Wells et al 2015].
In addition to the pathogenic variants in the cysteine residues in exons 10 and 11 that have been found in families with MEN2A, pathogenic variants in codons 631, 768, 790, 804, 844, and 891, and others in exons 5, 8, 10, 11, and 13-16, have been identified in a small number of families [Hofstra et al 1997, Berndt et al 1998, Wells et al 2015].
A pathogenic variant at codon 603 was reported in one family and appeared to be associated with both MTC and papillary thyroid cancer [Rey et al 2001]. The pathogenic variant p.Arg912Pro appeared to be associated with FMTC in two families [Jimenez et al 2004b].
Rare families with two pathogenic variants in cis configuration have been reported; for example, alteration of both codons 634 and 635 in one family with MEN2A; alteration of both codons 804 and 844 in one family with FMTC [Bartsch et al 2000]; and alteration of codons 804 and 806 in an individual with MEN2B [Miyauchi et al 1999].
For families in which MEN2A and Hirschsprung disease (HSCR) cosegregate, models to explain how the same pathogenic variant can cause gain of function and loss of function have been proposed [Takahashi et al 1999].
Mechanism of disease causation. Gain of function. In MEN2A, the majority of pathogenic variants occur in the extracellular cysteine-rich domain, allowing for aberrant intermolecular disulfide bonds and resulting in ligand-independent RET kinase dimerization and subsequent constitutive activation of the RET kinase. In MEN2B, p.Met918Thr results in increased ATP binding and autophosphorylation and subsequent dimerization-independent activation of the RET kinase [Salvatore et al 2021].
Note: In contrast to the activating pathogenic variants in MEN2, pathogenic variants that cause HSCR result in a decrease in the transforming activity of RET because RET molecules are stuck in the endoplasmic reticulum and do not reach the cell surface [Iwashita et al 1996] (see Genetically Related Disorders).
Table 9.
Notable RET Pathogenic Variants
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Reference Sequences | DNA Nucleotide Change (Alias 1) | Predicted Protein Change | Comment |
---|
NM_020975.6
NP_066124.1
| c.1825T>A | p.Cys609Ser |
|
c.1825T>C | p.Cys609Arg |
c.1825T>G | p.Cys609Gly |
c.1826G>A | p.Cys609Tyr |
c.1826G>T | p.Cys609Phe |
c.1831T>A | p.Cys611Ser |
c.1831T>C | p.Cys611Arg |
c.1831T>G | p.Cys611Gly |
c.1832G>A | p.Cys611Tyr |
c.1832G>T | p.Cys611Phe |
c.1833C>G | p.Cys611Trp |
c.1852T>A | p.Cys618Ser |
c.1852T>C | p.Cys618Arg |
c.1852T>G | p.Cys618Gly |
c.1853G>A | p.Cys618Tyr |
c.1853G>T | p.Cys618Phe |
c.1858T>A | p.Cys620Ser |
c.1858T>C | p.Cys620Arg |
c.1858T>G | p.Cys620Gly |
c.1859G>A | p.Cys620Tyr |
c.1859G>T | p.Cys620Phe |
c.1860C>G | p.Cys620Trp |
c.1888T>C | p.Cys630Arg |
c.1889G>A | p.Cys630Tyr |
c.1889G>C | p.Cys630Ser |
c.1889G>T | p.Cys630Phe |
c.1900T>C | p.Cys634Arg |
|
c.1900T>A | p.Cys634Ser |
c.1900T>G | p.Cys634Gly |
c.1901G>A | p.Cys634Tyr |
c.1901G>T | p.Cys634Phe |
c.1902C>G | p.Cys634Trp |
c.2304G>C | p.Glu768Asp | See Table 1, footnote 7. |
c.2370G>C | p.Leu790Phe |
|
c.2410G>A | p.Val804Met |
c.2410G>C | p.Val804Leu |
c.2647_2648delGCinsTT | p.Ala883Phe |
|
c.2735G>C | p.Arg912Pro | See Molecular Genetics. |
c.2753T>C | p.Met918Thr |
|
c.1842G>A | p.Val648Ile |
|
c.2071G>A | p.Gly691Ser |
c.2508C>T | p.Ser836= 1 |
c.2712C>G | p.Ser904= 1 |
NM_020975.6
| c.74-126G>T (IVS1-126G>T) | -- |
ATA = American Thyroid Association; H = high risk; HST = highest risk; MOD = moderate risk
Variants listed in the table have been provided by the authors. GeneReviews staff have not independently verified the classification of variants.
GeneReviews follows the standard naming conventions of the Human Genome Variation Society (varnomen.hgvs.org). See Quick Reference for an explanation of nomenclature.
- 1.
The protein sequence has not been analyzed, but no change in the amino acid is expected.
Modifier and predisposition variants. It is speculated that some rare variants (e.g., p.Val648Ile) may modify the phenotype when inherited with a pathogenic variant [Nunes et al 2002].
Evidence suggests that other rare allelic variants may be predisposition factors. For example, p.Gly691Ser and p.Ser904= may be low-penetrance risk factors for development of MTC [Robledo et al 2003, Elisei et al 2004] and may predispose individuals with a pathogenic variant to an earlier age of onset of MEN2A [Gil et al 2002, Robledo et al 2003, Cardot-Bauters et al 2008]; however, this finding was not replicated in a larger study [Lesueur et al 2006]. The p.Ser904= variant has been associated with an increased risk for nonfamilial MTC in at least two studies [Gimm et al 1999, Ruiz et al 2001] but not in another [Berard et al 2004]. A meta-analysis of six allelic variants found a modest nonfamilial MTC association with p.Ser904= and a strong association with the promoter benign variant IVS1-126G>T [Figlioli et al 2013]. Inactivating RET variants may provide a protective effect against the development of MEN2 phenotypes, such as c.73+9277T>C. This variant disrupts the RET gene enhancer and may counteract the constitutive RET activation seen in MEN2; it is rarely present in individuals with MEN2 [Borun et al 2012, Kaczmarek-Ryś et al 2018].