Conserved Protein Domain Family
MFS_MdtH_MDR_like

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cd17329: MFS_MdtH_MDR_like 
Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
This family is composed of Escherichia coli MdtH and similar multidrug resistance (MDR) transporters from bacteria and archaea, many of which remain uncharacterized. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. MdtH confers resistance to norfloxacin and enoxacin. MdtH-like MDR transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 340887
Aligned: 40 rows
Threshold Bit Score: 192.442
Created: 29-Jul-2008
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ##  ##  #                                #                            
A7ZZ23        12 KYFLLIDNMLVVLGFFVVFPLISIRFvdqmgWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFA 91  Escherichia col...
Q97C48        16 LWGVSTAAAVRSIGYGATWPFMAVYFneylhLSLIFVGFIFTLNAALSIVFSLFAGYLSDVIGRKWTLISGSVAGFILYA 95  Thermoplasma vo...
Q97BG6        17 LALSRLIRASGRVSSFIFLPLIFIEIy---sISFLITGLILGSSAIAMAFVQYYSGRWTDRIGRRFFLIVIPIPAAVFYF 93  Thermoplasma vo...
Q8NW16         7 VWWLVIGMALNITGSSFLWPLNTIYMkqelgKSLTVAGLVLMINSFGMVIGNLLGGSLFDKLGGYKTILIGTFTCLCSTT 86  Staphylococcus ...
O34546         5 LKILVIGMFINVTGASFLWPLNTIYIhnhlgKSLTVAGLVLMLNSGASVAGNLCGGFLFDKIGGFKSIMLGIAITLASLM 84  Bacillus subtil...
WP_011278869   4 INKLALIGGFRSFSGSIIWPYVGFALykvygLPLSVVSLFYLVQAVVNVIASISGGIITDYLGRKRSMALSILFSSIALL 83  Sulfolobus acid...
YP_004890316   7 LRWLFLANLLNNAGAAFMWPLTTVYMhnylkQSLTFSGIILFLMSLAMIAGNFIGGRLFDHWRPYYTALLGGGISTAILT 86  Lactobacillus p...
YP_193096     15 LIWLVVGELATWIGASFIWPLTSVYLnkqlhISLSLIGVVLFCNCAGNILGSIIAGRLYDKHDPYPLMLWGLGLDAGVLF 94  Lactobacillus a...
NP_465878      9 LWIVIIGMVLLYTGLSFIWPFNMIYMtqelgMSTTDASLVLLINSGVGIVSSIIGGIIFDRFSGFISLTIGTIILVLSTA 88  Listeria monocy...
YP_037473      8 IRFMLISSFFMSFGYFAVYAFLAIYLltflhFSAFQVGTVLTVMIITSRVIPLFSGLIADKIGYIIMMIAGLFLRGIGFI 87  Bacillus thurin...
Feature 1                                 ## ###  #                    #  ##  #                  
A7ZZ23        92 Tmgi----ahePWLLWFSCLLSGLGGTLFDPPRSALVVklirpqq-rgrffslLMMQDSAGAVIGALLGSWLlq------ 160 Escherichia col...
Q97C48        96 Llall--vyraVLIASALFVMTAFSGSLVYPSANAIVSdvttekn-remgytvYRIMANLGWAVGPLISSFIfr------ 166 Thermoplasma vo...
Q97BG6        94 LmfttvylhmsVILLIIFWYGTIITNSLQYPAIEASVAdvtstse-rlsgytlIRIMANLGAAVGPLAGGFLag------ 166 Thermoplasma vo...
Q8NW16        87 Llnf----fhgWPWYAVWLVMLGFGGGMIIPAIYAMAGavwpngg--rqtfnaIYLAQNIGVAVGAAMGGFVae------ 154 Staphylococcus ...
O34546        85 Glvf----fhdWPAYIVLLTIVGFGSGVVFPASYAMAGsvwpegg--rkafnaIYVAQNAGVAVGSALGGVVas------ 152 Bacillus subtil...
WP_011278869  84 Layv----lnmPLYVMVFILFQSFFNTVYNVSSTAIVGdmykgtsqlikaysrQRVGINAGWALGPLVGGYIft------ 153 Sulfolobus acid...
YP_004890316  87 Tlif----whsLWPYAIGLIIVGFGDGISMTVVNAYAAtvttrsn--ryvfnmLYLALNVGVVIGTLLVGYLle------ 154 Lactobacillus p...
YP_193096     95 Lmaa----fhgWPEYWIWLTLTGFLGGWNGTLINSVATslkkhpg--ryvfnvLYFSQNLGVVTGTLIVGYLyd------ 162 Lactobacillus a...
NP_465878     89 Slcf----fhgFPFFIWNLWAVGIAMGMVFSGLYAAAGlthptgg--rtgfnaIYVAQNIGVAVGPLLAGLLakqgmshv 162 Listeria monocy...
YP_037473     88 Algi----csdFYTISISSALIGFGTAFYEPAARAIFGsqpahtr--knlytyLNLSFNCGAIMGPIAGGFLll------ 155 Bacillus thurin...
Feature 1                                                                        #  ##  ###  #   
A7ZZ23       161 ydFRLVCATGAVLFVLCAAFNAWLLpawklstvr--------tpvregmtrVMRDKRFVTYVLTLAGYYMLAVQVMLMLP 232 Escherichia col...
Q97C48       167 ygFEFIFLFVAVANLLSTIVSLLYVkrnvryr-------------eakrnfFVVDYRLYLFSIPVFLLIMVSSQFSVTLP 233 Thermoplasma vo...
Q97BG6       167 inFSYIFLLASIFTVIELFILYYNVretflpara--------iaekiklkiFKTDRFFFLFTLVGVFLGFTLRQNGPTLT 238 Thermoplasma vo...
Q8NW16       155 fsFNYIFLANLIMYVVFALVAVTQFnieinakvkyp-----tqlditgkknKARFISLVLICAMFAICWVAYIQWESTIA 229 Staphylococcus ...
O34546       153 fsFSYVFLANAVLYLIFFFIVYFGFrniqtgdasqt-----svldydavnsKAKFAALIILSGGYVLGWLAYSQWSTTIA 227 Bacillus subtil...
WP_011278869 154 -fFSFRTLLLISSLLVLIIIPIVKIlpdfkg--------------agsilnFNLNKEFLTFLIPTFLTFAIVGQLGFSIL 218 Sulfolobus acid...
YP_004890316 155 lgINVVFMVATVCYLGLMAITLSTFnvtptvrtek------aapqkrdvtpKNHRQLIWMICLMIFTIYLSYALWESILS 228 Lactobacillus p...
YP_193096    163 ysITLLFVIAALLFVIAFINAVFNYrpiimfhkeriakgqsgksqkiepmpKRNFIMTMVFFAILGVTWLMYMNWESNLS 242 Lactobacillus a...
NP_465878    163 yiGSFVFAIAFAGYFFFFFHKIDWKservsaetkhr-----kkgakrefptKLALCSFILLLLTYLLCQLPHVQWQSNLS 237 Listeria monocy...
YP_037473    156 ldPIYAFSLTGSLMLLFAFIFYLLKnhfqvtten--------tsitlgiqaILQNKSFLLFSFIMIFFYIMFTQLTVALP 227 Bacillus thurin...
Feature 1                                #   #                                                  #
A7ZZ23       233 Imvndv-agapSAVKWMYAIEACLSLTLLYPIARWSEkh-fRLEHRLMAGLLIMSLSMMpvgmvsglqQLFNLICLFYIG 310 Escherichia col...
Q97C48       234 IfvvedlhivvSNLGYFYAVNGTVVVIGQYPISKLMSr--yPDIYALVFGAIFYSIGYLmvsfsrnlpSLIIDMIIITIG 311 Thermoplasma vo...
Q97BG6       239 VyafdlknlplMDIGYLYSLNGIVVIALQMPILRLMSsr-sNPVFWRGIGTIYYSIGFVilgiaptflYILLAMFIFTVG 317 Thermoplasma vo...
Q8NW16       230 Sftqsi-nismAQYSVLWTINGIMILVAQPLIKPILYllkgNLKKQMFVGIIIFMLSFFvtsfaenftIFVVGMIILTFG 308 Staphylococcus ...
O34546       228 Sytqsi-gislSLYSVLWTVNGILIVLGQPLVSFVVKkwaeSLKAQMVIGFIIFIVSFSmlltakqfpMFLAAMVILTIG 306 Bacillus subtil...
WP_011278869 219 TyyntilhfteFEVGILFAINGLLIVAFQDLAGRLIG----SKVKLISFGMVMYGLAYLaiafitnlyVAMLDVVFITIA 294 Sulfolobus acid...
YP_004890316 229 Vhmtnl-gipfRRYSEVWTINGLLIIVSQPIVALFNEr--fKIGTQIGLGITLFALSFLglvfarqyvDFIIIMVVLTIG 305 Lactobacillus p...
YP_193096    243 Vymvsl-gipfHLYSLLWTLNAGIIVVMQGILAKFPNif-kNLFHQIIFGICMFSLSFItlvfakdfaHFALSMIILTLG 320 Lactobacillus a...
NP_465878    238 TymteikgvtsSEYGNLWSLNGALIVLGQLVLIPVVNrfkkYLLVQIYIGIFLFILSFVvamnasvysGFVLGMIFLTLG 317 Listeria monocy...
YP_037473    228 Lhmkni-snsnQLATLVITINAITGVIFMVLFRKLFLk--yNTLSFIKYGVLLMSISFLliplfqhpyWLFICVIFFTIG 304 Bacillus thurin...
Feature 1        #   #   #               #  ##  ##  #                                          
A7ZZ23       311 SIIAEPARETLSAsladararGSYMGFSRLGLAIGGAIGYIGGGWlfdlgksahQPELPWMMLGIIGIFTFLALGWQF 388 Escherichia coli HS
Q97C48       312 ENLTSPNINTVVSkiapkesvGQFMGFIGMVNQLARAAAPSVGTLilys--lgqRPGLVWPVIDIFGISAAILFFSFR 387 Thermoplasma volc...
Q97BG6       318 EDFMSPTTQTIITtlapaekkGSYIGSYNLLTSFGRFFGTIFGLYflf---iyqKTTFTFWIIIATSTGVIGLLYIFM 392 Thermoplasma volc...
Q8NW16       309 EMFVWPAVPTIANqlapdgkqGQYQGFVNSAATVGKAFGPFLGGVlv------dAFNMRMMFIGMMLLLVFALILLMV 380 Staphylococcus au...
O34546       307 EMLVWPAVPTIANqlapkgkeGFYQGFVNSAATGGRMIGPLFGGVlvd----hyGIRALVLSLLVLLLISIATTLLYD 380 Bacillus subtilis...
WP_011278869 295 EMIVTPISQALANtlankdtrGKQMGLYSMVTGLGRVIGSSVSSElmny--ylyYPLGLWGSISLFGFSSAVLYYIIL 370 Sulfolobus acidoc...
YP_004890316 306 EVIGLPIAPAWVDdmaaddqrGKYQGRYNMALSLGRAVGPLFGGMmva----qfSYSLLFITVTILMLGSLALVLWRA 379 Lactobacillus pla...
YP_193096    321 ESTAFPAIPAYVNdlspltskGKYQGSIMVASGIGRAFGPLFGGLiidqagyisFFWVAAIIIAMMIIVMIPTYLKLY 398 Lactobacillus aci...
NP_465878    318 EMFAWPAIPTIAYqlapkgaaGLYQGLVNGMATAARMLAPFIGAIvvq----nlGGIKALFIGAFILLGCALISITLQ 391 Listeria monocyto...
YP_037473    305 ETLVLPNVDIATAnysnesytATYFGFYQLSLAFGFIIGNYIGTWftsnlnemyTPWLIFGGIGLTGFISLHILNIRK 382 Bacillus thuringi...

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