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Items: 1 to 20 of 81

1.

POINT technology illuminates the processing of polymerase-associated intact nascent transcripts

(Submitter supplied) Mammalian chromatin is the site of both RNA polymerase II (Pol II) transcription and coupled RNA processing. However, molecular details of such co-transcriptional mechanisms remain obscure, partly due to technical limitations in purifying authentic nascent transcripts. We present a new approach to purify and profile nascent RNA, called Polymerase Intact Nascent Transcript (POINT) technology. This three-pronged methodology maps nascent RNA 5’ends (POINT-5), establishes the kinetics of co-transcriptional splicing patterns (POINT-nano) and profiles whole transcription units (POINT-seq). more...
Organism:
Homo sapiens
Type:
Other
Platforms:
GPL26167 GPL24676
78 Samples
Download data: BB, BW
Series
Accession:
GSE159326
ID:
200159326

PubMed Full text in PMC Similar studies Analyze with GEO2RSRA Run Selector

2.

PromethION (Homo sapiens)

Organism:
Homo sapiens
89 Series
757 Samples
Download data
Platform
Accession:
GPL26167
ID:
100026167

3.

Illumina NovaSeq 6000 (Homo sapiens)

Organism:
Homo sapiens
17049 Series
931958 Samples
Download data
Platform
Accession:
GPL24676
ID:
100024676

4.

POINTseq_HCT116_CPSF73_KD_PlaB_Rep2

Organism:
Homo sapiens
Source name:
HCT116 CPSF73-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826676
ID:
304826676

SRA Run Selector

5.

POINTseq_HCT116_CPSF73_Ctrl_PlaB_Rep2

Organism:
Homo sapiens
Source name:
HCT116 CPSF73-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826675
ID:
304826675

SRA Run Selector

6.

POINTseq_HCT116_CPSF73_KD_PlaB_Rep1

Organism:
Homo sapiens
Source name:
HCT116 CPSF73-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826674
ID:
304826674

SRA Run Selector

7.

POINTseq_HCT116_CPSF73_Ctrl_PlaB_Rep1

Organism:
Homo sapiens
Source name:
HCT116 CPSF73-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826673
ID:
304826673

SRA Run Selector

8.

POINTseq_HCT116_CPSF73_KD_DMSO_Rep2

Organism:
Homo sapiens
Source name:
HCT116 CPSF73-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826672
ID:
304826672

SRA Run Selector

9.

POINTseq_HCT116_CPSF73_Ctrl_DMSO_Rep2

Organism:
Homo sapiens
Source name:
HCT116 CPSF73-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826671
ID:
304826671

SRA Run Selector

10.

POINTseq_HCT116_CPSF73_KD_DMSO_Rep1

Organism:
Homo sapiens
Source name:
HCT116 CPSF73-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826670
ID:
304826670

SRA Run Selector

11.

POINTseq_HCT116_CPSF73_Ctrl_DMSO_Rep1

Organism:
Homo sapiens
Source name:
HCT116 CPSF73-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826669
ID:
304826669

SRA Run Selector

12.

POINT5_HCT116_Xrn2_KD_PlaB_Rep2

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826668
ID:
304826668

SRA Run Selector

13.

POINT5_HCT116_Xrn2_Ctrl_PlaB_Rep2

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826667
ID:
304826667

SRA Run Selector

14.

POINT5_HCT116_Xrn2_KD_PlaB_Rep1

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826666
ID:
304826666

SRA Run Selector

15.

POINT5_HCT116_Xrn2_Ctrl_PlaB_Rep1

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826665
ID:
304826665

SRA Run Selector

16.

POINT5_HCT116_Xrn2_KD_DMSO_Rep2

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826664
ID:
304826664

SRA Run Selector

17.

POINT5_HCT116_Xrn2_Ctrl_DMSO_Rep2

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826663
ID:
304826663

SRA Run Selector

18.

POINT5_HCT116_Xrn2_KD_DMSO_Rep1

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826662
ID:
304826662

SRA Run Selector

19.

POINT5_HCT116_Xrn2_Ctrl_DMSO_Rep1

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826661
ID:
304826661

SRA Run Selector

20.

POINTseq_HCT116_Xrn2_KD_PlaB_Rep2

Organism:
Homo sapiens
Source name:
HCT116 Xrn2-AID cell
Platform:
GPL24676
Series:
GSE159326
Download data: BW
Sample
Accession:
GSM4826660
ID:
304826660

SRA Run Selector

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