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Items: 4

1.

Transcriptomics profiles of patient-matched normal kidney and ccRCC pairs

(Submitter supplied) VHL loss is the most common genetic alteration event in ccRCC, but its effect on epigenetic landscape has not been elucidated previously. We describe the genome-wide cis-regulatory landscapes of VHL-deficient ccRCC tumors by comparing the epigenetic changes in terms of histone modifications (H3K27ac, H3K4me1, H3K4me3) with the transcriptomics profiles in 10 pairs of normal kidney and ccRCC tissues.
Organism:
Homo sapiens
Type:
Expression profiling by high throughput sequencing
Platform:
GPL11154
20 Samples
Download data: BW
Series
Accession:
GSE102101
ID:
200102101
2.

VHL deficiency drives enhancer activation of oncogenes in clear cell renal cell carcinoma

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL16791 GPL11154
195 Samples
Download data: BED, BW
Series
Accession:
GSE86095
ID:
200086095
3.

Illumina HiSeq 2000 (Homo sapiens)

Platform
Accession:
GPL11154
ID:
100011154
4.

77972083N normal kidney RNA-seq

Organism:
Homo sapiens
Source name:
adjacent normal kidney
Platform:
GPL11154
Series:
GSE86095 GSE102101
Download data: BW
Sample
Accession:
GSM2723935
ID:
302723935
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